RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 USB1Q9BQ65 265 aaKnown RBP8.9□□□□□ -0.99
SMG6-213ENST00000573166 NLKQ9UBE8 527 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 TRAPPC2LQ9UL33 140 aa8.9□□□□□ -0.99
SMG6-213ENST00000573166 MRPS18CQ9Y3D5 142 aaKnown RBP8.9□□□□□ -0.99
SMG6-213ENST00000573166 IGLV3-32A0A0A0MS00 114 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 LOC100289279A0A1B0GTE1 492 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 A0A1B0GUH1 482 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 ADRB1P08588 477 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 PRKACAP17612 351 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 GLRA1P23415 457 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 FXYD4P59646 89 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 LTC4SQ16873 150 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 SFRP4Q6FHJ7 346 aaPredicted RBP8.89□□□□□ -0.99
SMG6-213ENST00000573166 ADGRE4PQ86SQ3 457 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 OR13G1Q8NGZ3 307 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 FAM57AQ8TBR7 257 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 ZNF431Q8TF32 576 aaPredicted RBP8.89□□□□□ -0.99
SMG6-213ENST00000573166 CMBLQ96DG6 245 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 CACNG6Q9BXT2 260 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 RABL2AQ9UBK7 228 aaPredicted RBP8.89□□□□□ -0.99
SMG6-213ENST00000573166 KCNIP3Q9Y2W7 256 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 PIEZO2Q9H5I5 2752 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 A0A0X1KG70 313 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 ZNF736B4DX44 427 aaPredicted RBP8.89□□□□□ -0.99
SMG6-213ENST00000573166 RAB3DO95716 219 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 TGM6O95932 706 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 KIR2DL3P43628 341 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 ZNF85Q03923 595 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 PAN3Q58A45 887 aaKnown RBP8.89□□□□□ -0.99
SMG6-213ENST00000573166 SLC25A30Q5SVS4 291 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 STAC2Q6ZMT1 411 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 C20orf196Q8IYI0 205 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 SNRNP40Q96DI7 357 aaKnown RBP8.89□□□□□ -0.99
SMG6-213ENST00000573166 NPAS1Q99742 590 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 SFXN3Q9BWM7 321 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 SLC5A7Q9GZV3 580 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 METTL8Q9H825 291 aaKnown RBP8.89□□□□□ -0.99
SMG6-213ENST00000573166 COPZ2Q9P299 210 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 RAB22AQ9UL26 194 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 MED13Q9UHV7 2174 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 NKX6-3A6NJ46 265 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 SULT1B1O43704 296 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 DHRS3O75911 302 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 IFNA21P01568 189 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 NDUFB7P17568 137 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 CCR9P51686 369 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 SWI5Q1ZZU3 235 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 SLC25A53Q5H9E4 307 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 LHFPL2Q6ZUX7 228 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 GLCCI1Q86VQ1 547 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 TMEM200AQ86VY9 491 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 SYT3Q9BQG1 590 aa8.89□□□□□ -0.99
SMG6-213ENST00000573166 ADAT1Q9BUB4 502 aaKnown RBP8.89□□□□□ -0.99
SMG6-213ENST00000573166 TMEM200CA6NKL6 621 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 DEGS1O15121 323 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 RAC2P15153 192 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 TNFRSF1AP19438 455 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 HLA-DMAP28067 261 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 THBS4P35443 961 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 MAGEB1P43366 347 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 PTH2RP49190 550 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 SRP9P49458 86 aaKnown RBP8.88□□□□□ -0.99
SMG6-213ENST00000573166 GPM6AP51674 278 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 ARSJQ5FYB0 599 aaPredicted RBP8.88□□□□□ -0.99
SMG6-213ENST00000573166 SKA3Q8IX90 412 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 SPERTQ8NA61 448 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 TMEM185AQ8NFB2 350 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 OR8B12Q8NGG6 310 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 RNF133Q8WVZ7 376 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 WDYHV1Q96HA8 205 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 PLK3Q9H4B4 646 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 BCO1Q9HAY6 547 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 MSTNO14793 375 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 BPNT1O95861 308 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 CRHP06850 196 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 RBMXP38159 391 aaKnown RBP8.88□□□□□ -0.99
SMG6-213ENST00000573166 LHX2P50458 406 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 MRPS10P82664 201 aaKnown RBP8.88□□□□□ -0.99
SMG6-213ENST00000573166 UBE2NLQ5JXB2 153 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 ZNF362Q5T0B9 420 aaPredicted RBP8.88□□□□□ -0.99
SMG6-213ENST00000573166 ELMOD3Q96FG2 381 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 ZNF426Q9BUY5 554 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 CCDC32Q9BV29 185 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 RDH8Q9NYR8 311 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 PLPP2O43688 288 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 AGTR1P30556 359 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 GNRHRP30968 328 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 GNG3P63215 75 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 AGAP6Q5VW22 663 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 RTL6Q6ICC9 239 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 OR10K2Q6IF99 312 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 SLC25A47Q6Q0C1 308 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 MDS2Q8NDY4 140 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 RDH5Q92781 318 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 CREB3L1Q96BA8 519 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 BARHL1Q9BZE3 327 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 KIAA1549LQ6ZVL6 1849 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 SPG11Q96JI7 2443 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 HS3ST1O14792 307 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms