RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ZNF829Q3KNS6 432 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 KRTAP27-1Q3LI81 207 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 MBNL2Q5VZF2 373 aaKnown RBP12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 FAM57BQ71RH2 274 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 SSX6Q7RTT6 188 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 LHFPL3Q86UP9 236 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 STX19Q8N4C7 294 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 BPIFB2Q8N4F0 458 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 KLF14Q8TD94 323 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 GGHQ92820 318 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 C1QTNF5Q9BXJ0 243 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 C7orf69Q9H7B7 122 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 FGF20Q9NP95 211 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 TUBG2Q9NRH3 451 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 INPP5EQ9NRR6 644 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 OPN4Q9UHM6 478 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 GNG8Q9UK08 70 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 GTF2A1LQ9UNN4 478 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 TPRKBQ9Y3C4 175 aa12.49□□□□□ -0.41
NPLOC4-207ENST00000572346 TMEM269A0A1B0GVZ9 245 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 ISPDA4D126 451 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 METTL15A6NJ78 407 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 SLC1A7O00341 560 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 SULT1C4O75897 302 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 RPP14O95059 124 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 FSHBP01225 129 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 ADH4P08319 380 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 PSMA6P60900 246 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 LCN2P80188 198 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 TIGD6Q17RP2 521 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 TP53I3Q53FA7 332 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 AWAT1Q58HT5 328 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 AHSA2Q719I0 299 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 C22orf15Q8WYQ4 148 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 TMEM80Q96HE8 168 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 ALG8Q9BVK2 526 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 OR10A2Q9H208 303 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 PLCXD1Q9NUJ7 323 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 UBAP1Q9NZ09 502 aa12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 CNOT2Q9NZN8 540 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 MRM2Q9UI43 246 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 EXOSC1Q9Y3B2 195 aaKnown RBP12.48□□□□□ -0.41
NPLOC4-207ENST00000572346 PRR32B1ATL7 298 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 PTGES3LE9PB15 166 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 J3QRE1 110 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 XRCC2O43543 280 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 DENRO43583 198 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 IGHA1P01876 353 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 PIPP12273 146 aaPredicted RBP12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 DCTDP32321 178 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 ACTA2P62736 377 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 UBA52P62987 128 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 ACTG2P63267 376 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 SLC3A1Q07837 685 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 ST3GAL4Q11206 333 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 SPRNQ5BIV9 151 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 COLCA1Q6ZS62 124 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 MRPL21Q7Z2W9 205 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 OR52H1Q8NGJ2 320 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 CMBLQ96DG6 245 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 EGLN1Q9GZT9 426 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 CYSLTR2Q9NS75 346 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 ERVK13-1Q9NX77 482 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 PSORS1C1Q9UIG5 152 aa12.47□□□□□ -0.41
NPLOC4-207ENST00000572346 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 H3BSA7 217 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 J3QLW9 94 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 TIMM8AO60220 97 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 CCDC159P0C7I6 412 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 ZNF19P17023 458 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 FPR2P25090 351 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 LIPAP38571 399 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 GALEQ14376 348 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 GFOD2Q3B7J2 385 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 SNAI3Q3KNW1 292 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 CDONQ4KMG0 1287 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 PGAP1Q75T13 922 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 DVL3Q92997 716 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 MYDGFQ969H8 173 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 POFUT1Q9H488 388 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 MSL2Q9HCI7 577 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 BLOC1S6Q9UL45 172 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 ZDHHC8Q9ULC8 765 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 DIMT1Q9UNQ2 313 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 PPIAL4AQ9Y536 164 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 SNX5Q9Y5X3 404 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 NPTNQ9Y639 398 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 R4GMQ9 66 aa12.46□□□□□ -0.41
NPLOC4-207ENST00000572346 PPIAL4EA0A075B759 164 aa12.45□□□□□ -0.42
NPLOC4-207ENST00000572346 PPIAL4CA0A0B4J2A2 164 aa12.45□□□□□ -0.42
NPLOC4-207ENST00000572346 GGT3PA6NGU5 568 aa12.45□□□□□ -0.42
NPLOC4-207ENST00000572346 ACOD1A6NK06 481 aa12.45□□□□□ -0.42
NPLOC4-207ENST00000572346 PPIAL4DF5H284 164 aa12.45□□□□□ -0.42
NPLOC4-207ENST00000572346 CD55P08174 381 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms