RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 DHPSP49366 369 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-207ENST00000572253 CTAG1AP78358 180 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 HMGN3Q15651 99 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 TSC22D1Q15714 1073 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 RTL6Q6ICC9 239 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 LANCL3Q6ZV70 420 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 FAM57BQ71RH2 274 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 POC1AQ8NBT0 407 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 FNDC9Q8TBE3 224 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 THAP3Q8WTV1 239 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-207ENST00000572253 SULT4A1Q9BR01 284 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 SLC5A7Q9GZV3 580 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 PRR13Q9NZ81 148 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 A0A0A6YYD4 124 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 K7EPK0 472 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 MFNGO00587 321 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 CST4P01036 141 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 KNG1P01042 644 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 HNRNPKP61978 463 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC40-207ENST00000572253 AKIRIN2Q53H80 203 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 CARFQ8N187 725 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 FAM71E2Q8N5Q1 922 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 OR10S1Q8NGN2 331 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 OR13G1Q8NGZ3 307 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 RLN3Q8WXF3 142 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 ELL3Q9HB65 397 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-207ENST00000572253 SLCO1B1Q9Y6L6 691 aa9.52□□□□□ -0.89
CCDC40-207ENST00000572253 LAMA3Q16787 3333 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 A0A1W2PNV4 684 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 EPOPA6NHQ4 379 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 ZNF726A6NNF4 738 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 C10orf142B7Z368 130 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 DUX1O43812 170 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 IFNA2P01563 188 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 SERPINA5P05154 406 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 SPP1P10451 314 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 FOSL2P15408 326 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 GLRA1P23415 457 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 MSX1P28360 303 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 BLVRBP30043 206 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 CSNK1EP49674 416 aaKnown RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 MEOX2P50222 304 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 F2RL1P55085 397 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 IAH1Q2TAA2 248 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 MST1LQ2TV78 715 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 ZNF528Q3MIS6 628 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 CARD17Q5XLA6 110 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 RPL7L1Q6DKI1 246 aaKnown RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 PLPP5Q8NEB5 264 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 OR51F2Q8NH61 342 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 RXFP4Q8TDU9 374 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 PGAM5Q96HS1 289 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 OR10C1Q96KK4 312 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 MRGPRX4Q96LA9 322 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 CLEC1BQ9P126 229 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 ASH2LQ9UBL3 628 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 KPTNQ9Y664 436 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 LHFPL6Q9Y693 200 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 C1orf196B1AJZ1 125 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 SDCBPO00560 298 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 AGPAT2O15120 278 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 JTBO76095 146 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 S100A6P06703 90 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 TMEM50BP56557 158 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 GRB2P62993 217 aaKnown RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 OPN5Q6U736 354 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 SHISA6Q6ZSJ9 500 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 SGPP2Q8IWX5 399 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 DEFB119Q8N690 84 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 RTBDNQ9BSG5 229 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 IGHV3-20A0A0C4DH32 117 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 PRSS44E7EML9 344 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 NR2C1P13056 603 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 RPL12P30050 165 aaKnown RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 CD80P33681 288 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 SULT1A2P50226 295 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 B2MP61769 119 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 RTN4RL2Q86UN3 420 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 C2CD4CQ8TF44 421 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 CMSS1Q9BQ75 279 aaKnown RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 PARP11Q9NR21 331 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 SLC22A11Q9NSA0 550 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 ZNF701Q9NV72 531 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-207ENST00000572253 KLHL13Q9P2N7 655 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 OSGIN2Q9Y236 505 aa9.51□□□□□ -0.89
CCDC40-207ENST00000572253 SERPINE3A8MV23 424 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 LMO7DNF2Z398 122 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 FBXO24O75426 580 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 RAD51DO75771 328 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 HOXB1P14653 301 aaPredicted RBP9.5□□□□□ -0.89
CCDC40-207ENST00000572253 CD27P26842 260 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 OR1D5P58170 312 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 MYBPHQ13203 477 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 NSUN5P2Q63ZY6 315 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 C16orf47Q6ZP98 133 aaPredicted RBP9.5□□□□□ -0.89
CCDC40-207ENST00000572253 LHFPL1Q86WI0 220 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 SULF2Q8IWU5 870 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 SFT2D1Q8WV19 159 aa9.5□□□□□ -0.89
CCDC40-207ENST00000572253 ACKR4Q9NPB9 350 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms