RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 SHANK1Q9Y566 2161 aa5.33□□□□□ -1.56
TRAPPC1-204ENST00000571947 SPTBN4Q9H254 2564 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 ANKRD20A5PA0PJZ0 165 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 MEIOCA2RUB1 952 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 METTL21EPA6NDL7 271 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 NAP1L6A6NFF2 107 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 H7C417 338 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 DLL1O00548 723 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 WDR1O75083 606 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 RBBP9O75884 186 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 SCGNO76038 276 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 CRHP06850 196 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 VSIG8P0DPA2 414 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 NAT2P11245 290 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PTHLHP12272 177 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 COX5AP20674 150 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PRKACBP22694 351 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PRSS3P35030 304 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 BTCP35070 178 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PTGER4P35408 488 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 APLNRP35414 380 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 OR3A4PP47883 348 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 SRP9P49458 86 aaKnown RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 UCNP55089 124 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 TMPRSS3P57727 454 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 AP3S2P59780 193 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 BTG1P62324 171 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 SSBP1Q04837 148 aaKnown RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PMPCAQ10713 525 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 UNC119Q13432 240 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 CNN3Q15417 329 aaKnown RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 KISS1Q15726 138 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 FAM189A2Q15884 450 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GABRA6Q16445 453 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GSG1Q2KHT4 349 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 EIF2S3LQ2VIR3 472 aaKnown RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 HIKESHIQ53FT3 197 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PLA1AQ53H76 456 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 CLVS2Q5SYC1 327 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 C1orf185Q5T7R7 199 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 AGAP6Q5VW22 663 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 OLFML2AQ68BL7 652 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 ZNF324BQ6AW86 544 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 AWAT2Q6E213 333 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 RTL6Q6ICC9 239 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 MTFR2Q6P444 385 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 VWA1Q6PCB0 445 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 FAM180AQ6UWF9 173 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GLIPR1L1Q6UWM5 242 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 Q6ZT83 130 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 KRT74Q7RTS7 529 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 MDP1Q86V88 176 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 ZNF584Q8IVC4 421 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 ZNF101Q8IZC7 436 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GCNT2Q8N0V5 402 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 CNEP1R1Q8N9A8 125 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PNLDC1Q8NA58 520 aaKnown RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 C1orf162Q8NEQ5 155 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 KCNG3Q8TAE7 436 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GPX8Q8TED1 209 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 DEDD2Q8WXF8 326 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GCDHQ92947 438 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PIGTQ969N2 578 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 SPSB1Q96BD6 273 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 TECTBQ96PL2 329 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 SPACA5Q96QH8 159 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GPER1Q99527 375 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 NUDT16L1Q9BRJ7 211 aaKnown RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 MARVELD1Q9BSK0 173 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 DPAGT1Q9H3H5 408 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 SCPEP1Q9HB40 452 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GPR173Q9NS66 373 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 NPAP1Q9NZP6 1156 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 COPZ2Q9P299 210 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 MYEF2Q9P2K5 600 aaKnown RBP5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 NLKQ9UBE8 527 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 GHRLQ9UBU3 117 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 MTFP1Q9UDX5 166 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 CFAP54Q96N23 3096 aa5.32□□□□□ -1.56
TRAPPC1-204ENST00000571947 PCNX1Q96RV3 2341 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 ZNF816-ZNF321PA0A0X1KG74 233 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 C5orf49A4QMS7 147 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 WIPF3A6NGB9 483 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 FIGNL2A6NMB9 653 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 INMT-MINDY4F8WBC2 141 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 RAB27BO00194 218 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 GMDSO60547 372 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 CDC14BO60729 498 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 RAD51DO75771 328 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 TNFSF13O75888 250 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 NRASP01111 189 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 CGAP01215 116 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 TPOP07202 933 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 HNRNPCP07910 306 aaKnown RBP eCLIP5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 CHRM2P08172 466 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 MELTFP08582 738 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 HOXD4P09016 255 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 ZNF14P17017 642 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 CCNOP22674 350 aa5.31□□□□□ -1.56
TRAPPC1-204ENST00000571947 HLA-DMAP28067 261 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms