RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 LMO4P61968 165 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 SRSF2Q01130 221 aaKnown RBP12.81□□□□□ -0.36
RAB40B-203ENST00000570676 MOGQ16653 247 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 TSTQ16762 297 aaKnown RBP12.81□□□□□ -0.36
RAB40B-203ENST00000570676 RSPO1Q2MKA7 263 aaPredicted RBP12.81□□□□□ -0.36
RAB40B-203ENST00000570676 KRTAP27-1Q3LI81 207 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 XAF1Q6GPH4 301 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 UNQ6126/PRO20091Q6UXV3 157 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 ZNF367Q7RTV3 350 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 C1orf174Q8IYL3 243 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 ZNF283Q8N7M2 679 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 FCGR1BQ92637 280 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 RORBQ92753 470 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 C4orf45Q96LM5 186 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 SAP30LQ9HAJ7 183 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 TRIM36Q9NQ86 728 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 TREM2Q9NZC2 230 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 SCOCQ9UIL1 159 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 GRIP1Q9Y3R0 1128 aa12.81□□□□□ -0.36
RAB40B-203ENST00000570676 TMEM269A0A1B0GVZ9 245 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 E9PI62 339 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 M0R135 149 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 LALBAP00709 142 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 APOC1P02654 83 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 ACSM4P0C7M7 580 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 HSMCR30P0CW71 290 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 OTX1P32242 354 aaPredicted RBP12.8□□□□□ -0.36
RAB40B-203ENST00000570676 SLC6A9P48067 706 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 PSMA6P60900 246 aaKnown RBP12.8□□□□□ -0.36
RAB40B-203ENST00000570676 MFGE8Q08431 387 aaPredicted RBP12.8□□□□□ -0.36
RAB40B-203ENST00000570676 MRPL28Q13084 256 aaKnown RBP12.8□□□□□ -0.36
RAB40B-203ENST00000570676 DOC2BQ14184 412 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 ZNF829Q3KNS6 432 aaPredicted RBP12.8□□□□□ -0.36
RAB40B-203ENST00000570676 FAM209AQ5JX71 171 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 AVPI1Q5T686 147 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 UBE2UQ5VVX9 321 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 DRAM2Q6UX65 266 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 GLCCI1Q86VQ1 547 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 HAVCR2Q8TDQ0 301 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 ZNF799Q96GE5 643 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 BRD7Q9NPI1 651 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 CGGBP1Q9UFW8 167 aaPredicted RBP12.8□□□□□ -0.36
RAB40B-203ENST00000570676 GTF2A1LQ9UNN4 478 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 N6AMT1Q9Y5N5 214 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 R4GMQ9 66 aa12.8□□□□□ -0.36
RAB40B-203ENST00000570676 LOC110117498-PIK3R3F6TDL0 507 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 SPRY3O43610 288 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 SRSF10O75494 262 aaKnown RBP12.79□□□□□ -0.36
RAB40B-203ENST00000570676 INMTO95050 263 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 PNPP00491 289 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 ANXA2P07355 339 aaKnown RBP12.79□□□□□ -0.36
RAB40B-203ENST00000570676 MSMBP08118 114 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 SLC2A1P11166 492 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 PSMB9P28065 219 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 GTF2A1P52655 376 aaPredicted RBP12.79□□□□□ -0.36
RAB40B-203ENST00000570676 ZNF121P58317 390 aaPredicted RBP12.79□□□□□ -0.36
RAB40B-203ENST00000570676 TAS2R43P59537 309 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 ACSM1Q08AH1 577 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 SPRNQ5BIV9 151 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 NAA40Q86UY6 237 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 ZFP41Q8N8Y5 198 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 MUL1Q969V5 352 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 RNF166Q96A37 237 aaPredicted RBP12.79□□□□□ -0.36
RAB40B-203ENST00000570676 TMEM186Q96B77 213 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 COG8Q96MW5 612 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 DCLRE1CQ96SD1 692 aaKnown RBP12.79□□□□□ -0.36
RAB40B-203ENST00000570676 MGLLQ99685 303 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 LPAR2Q9HBW0 351 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 DECR2Q9NUI1 292 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 TBCCD1Q9NVR7 557 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 FAM206AQ9NX38 181 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 WIPI2Q9Y4P8 454 aa12.79□□□□□ -0.36
RAB40B-203ENST00000570676 DYSFO75923 2080 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 PLSCR5A0PG75 271 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 CLDN25C9JDP6 229 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 TPD52L2O43399 206 aaKnown RBP12.78□□□□□ -0.36
RAB40B-203ENST00000570676 CD55P08174 381 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 JUNBP17275 347 aaPredicted RBP12.78□□□□□ -0.36
RAB40B-203ENST00000570676 TGM4P49221 684 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 MMP16P51512 607 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 NANOS3P60323 173 aaKnown RBP12.78□□□□□ -0.36
RAB40B-203ENST00000570676 BDH1Q02338 343 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 MLLT11Q13015 90 aaPredicted RBP12.78□□□□□ -0.36
RAB40B-203ENST00000570676 PSG7Q13046 419 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 HNRNPA0Q13151 305 aaKnown RBP12.78□□□□□ -0.36
RAB40B-203ENST00000570676 ALKBH1Q13686 389 aaKnown RBP12.78□□□□□ -0.36
RAB40B-203ENST00000570676 TIGD6Q17RP2 521 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 CCDC58Q4VC31 144 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 BCL2L15Q5TBC7 163 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 FDX2Q6P4F2 183 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 RPL22L1Q6P5R6 122 aaKnown RBP12.78□□□□□ -0.36
RAB40B-203ENST00000570676 FAM57BQ71RH2 274 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 CATSPERDQ86XM0 798 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 OR2G2Q8NGZ5 317 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 OR51F2Q8NH61 342 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 ELMOD3Q96FG2 381 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 OPALINQ96PE5 141 aa12.78□□□□□ -0.36
RAB40B-203ENST00000570676 REPIN1Q9BWE0 567 aaKnown RBP12.78□□□□□ -0.36
RAB40B-203ENST00000570676 ZNF665Q9H7R5 613 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms