RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SLC6A9P48067 706 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 RAB35Q15286 201 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 NRF1Q16656 503 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 GGTA1PQ4G0N0 100 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 NUFIP2Q7Z417 695 aaKnown RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 AMIGO2Q86SJ2 522 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 OR5B3Q8NH48 314 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 NUDCD2Q8WVJ2 157 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 TMEM239Q8WW34 195 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 PPIL3Q9H2H8 161 aaKnown RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 PSORS1C1Q9UIG5 152 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 UNC13CQ8NB66 2214 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 C1orf196B1AJZ1 125 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 PPIAL4DF5H284 164 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 CA11O75493 328 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 MPIG6BO95866 241 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 HOXB6P17509 224 aaKnown RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 RBMS2Q15434 407 aaKnown RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 PSG3Q16557 428 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 BSXQ3C1V8 233 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 FAM220AQ7Z4H9 259 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 ZNF843Q8N446 348 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 KBTBD8Q8NFY9 601 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 OR4Q3Q8NH05 313 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 OR5AK3PQ8NH89 298 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 SORCS2Q96PQ0 1159 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 EFCAB1Q9HAE3 211 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 CDH20Q9HBT6 801 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 ZBTB20Q9HC78 741 aaPredicted RBP5.89□□□□□ -1.47
SMG1-217ENST00000569764 TMEM9Q9P0T7 183 aa5.89□□□□□ -1.47
SMG1-217ENST00000569764 NME4O00746 187 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 HSBP1O75506 76 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 TFP02787 698 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 GTF2F2P13984 249 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 S100A2P29034 98 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 TNK1Q13470 666 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 HAGHLQ6PII5 290 aaPredicted RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 IGFL3Q6UXB1 125 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 RNF165Q6ZSG1 346 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 TMEM251Q8N6I4 163 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 OR4F15Q8NGB8 312 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 C2CD4CQ8TF44 421 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 TOMM40LQ969M1 308 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 ISOC2Q96AB3 205 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 IL17FQ96PD4 163 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 P2RX4Q99571 388 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 ZNF860A6NHJ4 632 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 KRBOX1C9JBD0 128 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 RNASEK-C17orf49H0YIS7 233 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 OR2F2O95006 317 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 TBXA2RP21731 343 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 RPL32P62910 135 aaKnown RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 DEFA5Q01523 94 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 RIPPLY1Q0D2K3 151 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 ACKR1Q16570 336 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 TRMT5Q32P41 509 aaKnown RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 RABL3Q5HYI8 236 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 DMRTC1Q5HYR2 192 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 AGAP6Q5VW22 663 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 HACD2Q6Y1H2 254 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 SHISA6Q6ZSJ9 500 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 DNAJC22Q8N4W6 341 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 ISOC1Q96CN7 298 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 CCDC140Q96MF4 163 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 DEFB127Q9H1M4 99 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 IKZF5Q9H5V7 419 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 RNF121Q9H920 327 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 SDR39U1Q9NRG7 319 aaPredicted RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 INPP5EQ9NRR6 644 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 ASB6Q9NWX5 421 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 AUP1Q9Y679 476 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 HEATR5BQ9P2D3 2071 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 PRAF2O60831 178 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 ZNF780AO75290 641 aaPredicted RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 RGS11O94810 467 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 FADS2O95864 444 aaKnown RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 MTCP1P56278 107 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 KIAA0040Q15053 153 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 RNPS1Q15287 305 aaKnown RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 LY6G6FQ5SQ64 297 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 CBLN3Q6UW01 205 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 CD163Q86VB7 1156 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 MUC20Q8N307 709 aaPredicted RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 OR52E5Q8NH55 327 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 OR2AE1Q8NHA4 323 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 RBPMSQ93062 196 aaKnown RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 RNASE6Q93091 150 aaKnown RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 DDIT4LQ96D03 193 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 OR4K3Q96R72 315 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 SLC6A7Q99884 636 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 PECRQ9BY49 303 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 COMMD4Q9H0A8 199 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 NANOGQ9H9S0 305 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 PLSCR3Q9NRY6 295 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 A0A087WXM4 84 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.88□□□□□ -1.47
SMG1-217ENST00000569764 C9orf170A2RU37 121 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 OR2T1O43869 369 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 APOC3P02656 99 aa5.88□□□□□ -1.47
SMG1-217ENST00000569764 FURINP09958 794 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms