RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RDH10Q8IZV5 341 aa20.03■□□□□ 0.8
RAB40C-212ENST00000569575 CELF2-AS1Q8N7Q2 184 aa20.03■□□□□ 0.8
RAB40C-212ENST00000569575 ZFP41Q8N8Y5 198 aa20.03■□□□□ 0.8
RAB40C-212ENST00000569575 OR5D14Q8NGL3 314 aa20.03■□□□□ 0.8
RAB40C-212ENST00000569575 TSEN15Q8WW01 171 aaKnown RBP20.03■□□□□ 0.8
RAB40C-212ENST00000569575 DYNLRB1Q9NP97 96 aa20.03■□□□□ 0.8
RAB40C-212ENST00000569575 FZR1Q9UM11 496 aa20.03■□□□□ 0.8
RAB40C-212ENST00000569575 ANXA2P2A6NMY6 339 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 C17orf100A8MU93 164 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 CD8AP01732 235 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 SOD3P08294 240 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 ACKR3P25106 362 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 ZNF81P51508 661 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 TIMM50Q3ZCQ8 353 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 IGFBPL1Q8WX77 278 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 HIST1H2AAQ96QV6 131 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 CHST5Q9GZS9 411 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 RAB1BQ9H0U4 201 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 LAMP3Q9UQV4 416 aa20.02■□□□□ 0.8
RAB40C-212ENST00000569575 ZNF879B4DU55 563 aa20.01■□□□□ 0.79
RAB40C-212ENST00000569575 OVOL3O00110 214 aa20.01■□□□□ 0.79
RAB40C-212ENST00000569575 CD55P08174 381 aa20.01■□□□□ 0.79
RAB40C-212ENST00000569575 ZNF20P17024 532 aa20.01■□□□□ 0.79
RAB40C-212ENST00000569575 RPS11P62280 158 aaKnown RBP eCLIP20.01■□□□□ 0.79
RAB40C-212ENST00000569575 UNQ9370/PRO34162Q6UXP9 181 aa20.01■□□□□ 0.79
RAB40C-212ENST00000569575 C14orf119Q9NWQ9 140 aa20.01■□□□□ 0.79
RAB40C-212ENST00000569575 SF3B6Q9Y3B4 125 aaKnown RBP20.01■□□□□ 0.79
RAB40C-212ENST00000569575 GPX5O75715 221 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 SC5DO75845 299 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 NRASP01111 189 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 PAX1P15863 534 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 DOC2BQ14184 412 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 CD200R1LQ6Q8B3 271 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 GDPGP1Q6ZNW5 385 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 NEU4Q8WWR8 484 aaPredicted RBP20■□□□□ 0.79
RAB40C-212ENST00000569575 RGP1Q92546 391 aaPredicted RBP20■□□□□ 0.79
RAB40C-212ENST00000569575 NINJ1Q92982 152 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 TMEM106AQ96A25 262 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 CCL19Q99731 98 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 PAPOLGQ9BWT3 736 aaKnown RBP20■□□□□ 0.79
RAB40C-212ENST00000569575 EGLN1Q9GZT9 426 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 MYEF2Q9P2K5 600 aaKnown RBP20■□□□□ 0.79
RAB40C-212ENST00000569575 CKLFQ9UBR5 152 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 IL19Q9UHD0 177 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 RHBDD3Q9Y3P4 386 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 ARFGEF3Q5TH69 2177 aa20■□□□□ 0.79
RAB40C-212ENST00000569575 PNMA8CA0A1B0GUJ8 204 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 ANKRD61A6NGH8 418 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 ARL6IP5O75915 188 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 RPL5P46777 297 aaKnown RBP19.99■□□□□ 0.79
RAB40C-212ENST00000569575 GP2P55259 537 aaKnown RBP19.99■□□□□ 0.79
RAB40C-212ENST00000569575 CNN3Q15417 329 aaKnown RBP19.99■□□□□ 0.79
RAB40C-212ENST00000569575 SSX1Q16384 188 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 ALKBH6Q3KRA9 238 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 ACSM3Q53FZ2 586 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 ZDHHC23Q8IYP9 409 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 OR5AS1Q8N127 324 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 BHLHE23Q8NDY6 225 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 OR5A2Q8NGI9 324 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 OR51A4Q8NGJ6 313 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 ERGIC1Q969X5 290 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 FGGYQ96C11 551 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 TRMT61AQ96FX7 289 aaKnown RBP19.99■□□□□ 0.79
RAB40C-212ENST00000569575 MICU1Q9BPX6 476 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 SOX7Q9BT81 388 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 TMED9Q9BVK6 235 aa19.99■□□□□ 0.79
RAB40C-212ENST00000569575 TRDV1A0A1B0GX56 115 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 OR5B21A6NL26 309 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 RGS9O75916 674 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-212ENST00000569575 FAHP16930 419 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 TNFRSF1AP19438 455 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 PRKACBP22694 351 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 CA6P23280 308 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 ALDH3B1P43353 468 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 SRP9P49458 86 aaKnown RBP19.98■□□□□ 0.79
RAB40C-212ENST00000569575 OR8G1Q15617 311 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 CEACAM21Q3KPI0 293 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 TMEM255AQ5JRV8 349 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 DNAAF1Q8NEP3 725 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 OR10AC1Q8NH08 325 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 OR8S1Q8NH09 359 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 PIGCQ92535 297 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 SPSB1Q96BD6 273 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 CPNE2Q96FN4 548 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-212ENST00000569575 ZCCHC4Q9H5U6 513 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 FOXJ3Q9UPW0 622 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 SLC7A11Q9UPY5 501 aa19.98■□□□□ 0.79
RAB40C-212ENST00000569575 TRBV5-7A0A0A0MS05 114 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 TMEM210A6NLX4 147 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 PTBP3O95758 552 aaKnown RBP19.97■□□□□ 0.79
RAB40C-212ENST00000569575 TFAP2AP05549 437 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 FSTP19883 344 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 FGF9P31371 208 aaPredicted RBP19.97■□□□□ 0.79
RAB40C-212ENST00000569575 ALDH3B2P48448 385 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 MRPS11P82912 194 aaKnown RBP19.97■□□□□ 0.79
RAB40C-212ENST00000569575 PRDX4Q13162 271 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 TESK1Q15569 626 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 Q6ZR03 302 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 UBASH3BQ8TF42 649 aa19.97■□□□□ 0.79
RAB40C-212ENST00000569575 RTL8AQ9BWD3 113 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms