RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 PAICSP22234 425 aaKnown RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 GCSHP23434 173 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 CHATP28329 748 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 AQP2P41181 271 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 VDAC2P45880 294 aaPredicted RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 FADDQ13158 208 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 CNN3Q15417 329 aaKnown RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 RGNQ15493 299 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 TCTEX1D4Q5JR98 221 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 TEX36Q5VZQ5 186 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 UNQ9370/PRO34162Q6UXP9 181 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 MSANTD1Q6ZTZ1 278 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 FGFRL1Q8N441 504 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 OR5AU1Q8NGC0 362 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 NFKBIDQ8NI38 313 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 PIFOQ8TCI5 191 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 SLC7A6Q92536 515 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 APOBEC3DQ96AK3 386 aaPredicted RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 MPP4Q96JB8 637 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 RCHY1Q96PM5 261 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 OR5M11Q96RB7 305 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 ZBTB18Q99592 522 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 MCHR1Q99705 422 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 EBF4Q9BQW3 602 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 CCDC28BQ9BUN5 200 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 ZNF426Q9BUY5 554 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 CDCA4Q9BXL8 241 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 PRSS22Q9GZN4 317 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 TXNIPQ9H3M7 391 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 MUC13Q9H3R2 512 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 METTL8Q9H825 291 aaKnown RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 ATPIF1Q9UII2 106 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 PRPF19Q9UMS4 504 aaKnown RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 NOP16Q9Y3C1 178 aaKnown RBP4.72□□□□□ -1.65
CDH13-212ENST00000569144 STAB2Q8WWQ8 2551 aa4.72□□□□□ -1.65
CDH13-212ENST00000569144 A0A1B0GW55 424 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 TCRBV4S1A1TA0A5B7 111 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 UNC119BA6NIH7 251 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 CPSF4LA6NMK7 179 aaKnown RBP4.71□□□□□ -1.66
CDH13-212ENST00000569144 M0R1W7 72 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 M0R3H8 397 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 F2RL2O00254 374 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 SYNGR1O43759 233 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 EDF1O60869 148 aaKnown RBP4.71□□□□□ -1.66
CDH13-212ENST00000569144 CD1AP06126 327 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 VIMP08670 466 aaKnown RBP4.71□□□□□ -1.66
CDH13-212ENST00000569144 TSPAN19P0C672 248 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 CCDC159P0C7I6 412 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 DUX4L2P0CJ85 424 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 DUX4L3P0CJ86 424 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 DUX4L4P0CJ87 422 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 DUX4L5P0CJ88 424 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 DUX4L6P0CJ89 424 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 DUX4L7P0CJ90 424 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 FUT1P19526 365 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 POLR2JP52435 117 aaKnown RBP4.71□□□□□ -1.66
CDH13-212ENST00000569144 AQP6Q13520 282 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 OR8G1Q15617 311 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 ENTPD8Q5MY95 495 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 ZFAND6Q6FIF0 208 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 HCP5Q6MZN7 132 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 REEP3Q6NUK4 255 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 DUX4L9Q6RFH8 374 aaPredicted RBP4.71□□□□□ -1.66
CDH13-212ENST00000569144 ADAMTSL5Q6ZMM2 481 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 CCDC121Q6ZUS5 278 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 SLC36A1Q7Z2H8 476 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 FUNDC1Q8IVP5 155 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 GCSAMQ8N6F7 178 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 OR1F12Q8NHA8 337 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 MOSPD2Q8NHP6 518 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 ADAMTS16Q8TE57 1224 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 DYDC1Q8WWB3 177 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 ACOT11Q8WXI4 607 aaPredicted RBP4.71□□□□□ -1.66
CDH13-212ENST00000569144 GTF2H4Q92759 462 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 ITCHQ96J02 903 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 HCAR1Q9BXC0 346 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 SLC22A4Q9H015 551 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 RMND5AQ9H871 391 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 MEPEQ9NQ76 525 aaPredicted RBP4.71□□□□□ -1.66
CDH13-212ENST00000569144 DUX4Q9UBX2 424 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 SLC7A7Q9UM01 511 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 AURKCQ9UQB9 309 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 TCF19Q9Y242 345 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 ANGPT4Q9Y264 503 aa4.71□□□□□ -1.66
CDH13-212ENST00000569144 IGHV3OR15-7A0A075B7D8 119 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 TRBV5-3A0A0A0MS03 114 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 TRAPPC13A5PLN9 417 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 RBMY1BA6NDE4 496 aaKnown RBP4.7□□□□□ -1.66
CDH13-212ENST00000569144 RBMY1EA6NEQ0 496 aaKnown RBP4.7□□□□□ -1.66
CDH13-212ENST00000569144 NKX6-3A6NJ46 265 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 VGLL3A8MV65 326 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 CLIC1O00299 241 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 NDUFB3O43676 98 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 GMDSO60547 372 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 SERPINB7O75635 380 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 OR7A10O76100 309 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 IGF2P01344 180 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 MT-ND1P03886 318 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 ELANEP08246 267 aa4.7□□□□□ -1.66
CDH13-212ENST00000569144 RBMY1DP0C7P1 496 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms