RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 RAB39BQ96DA2 213 aa7.76□□□□□ -1.17
CAPN3-219ENST00000569136 MSI2Q96DH6 328 aaKnown RBP7.76□□□□□ -1.17
CAPN3-219ENST00000569136 MYCBPQ99417 103 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-219ENST00000569136 C9orf16Q9BUW7 83 aa7.76□□□□□ -1.17
CAPN3-219ENST00000569136 BEX2Q9BXY8 128 aa7.76□□□□□ -1.17
CAPN3-219ENST00000569136 GABARAPL3Q9BY60 117 aa7.76□□□□□ -1.17
CAPN3-219ENST00000569136 TMEM106BQ9NUM4 274 aa7.76□□□□□ -1.17
CAPN3-219ENST00000569136 KCNS2Q9ULS6 477 aa7.76□□□□□ -1.17
CAPN3-219ENST00000569136 N6AMT1Q9Y5N5 214 aa7.76□□□□□ -1.17
CAPN3-219ENST00000569136 NPTNQ9Y639 398 aa7.76□□□□□ -1.17
CAPN3-219ENST00000569136 LRP5LA4QPB2 252 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 SAC3D1A6NKF1 404 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ANKRD30BLA7E2S9 258 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 SELENOFO60613 162 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 IFNA2P01563 188 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ANXA2P07355 339 aaKnown RBP7.75□□□□□ -1.17
CAPN3-219ENST00000569136 HNF1AP20823 631 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ATP6V1E1P36543 226 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 CDH15P55291 814 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ZNF121P58317 390 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-219ENST00000569136 LMO4P61968 165 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 TIGD6Q17RP2 521 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ZNF181Q2M3W8 571 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 CHRFAM7AQ494W8 412 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 GLYATL3Q5SZD4 288 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 MEDAGQ5VYS4 303 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ZBTB49Q6ZSB9 765 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 PRSS45Q7RTY3 260 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 LRRC28Q86X40 367 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-219ENST00000569136 EGFL6Q8IUX8 553 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ZNF679Q8IYX0 411 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 SPICQ8N5J4 248 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 CSNK2A3Q8NEV1 391 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 OR11L1Q8NGX0 322 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 CLDND2Q8NHS1 167 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ITLN1Q8WWA0 313 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 STMN2Q93045 179 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 PGAM5Q96HS1 289 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 OR2V2Q96R30 315 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 IL4I1Q96RQ9 567 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 CNN2Q99439 309 aaKnown RBP7.75□□□□□ -1.17
CAPN3-219ENST00000569136 RIBC2Q9H4K1 309 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ABCB9Q9NP78 766 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 TREM2Q9NZC2 230 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 WIPI2Q9Y4P8 454 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 ATRQ13535 2644 aa7.75□□□□□ -1.17
CAPN3-219ENST00000569136 TMEM269A0A1B0GVZ9 245 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 CCDC182A6NF36 153 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 TMEM178BH3BS89 294 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 MPZL2O60487 215 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 BAG2O95816 211 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 SBK2P0C263 348 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 OR2T7P0C7T2 308 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 PSKH1P11801 424 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 IRF2P14316 349 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 ATP6V1B1P15313 513 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 CA6P23280 308 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 HTR1FP30939 366 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 THBS2P35442 1172 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 POLR2IP36954 125 aaKnown RBP7.74□□□□□ -1.17
CAPN3-219ENST00000569136 CD200P41217 278 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 NAA10P41227 235 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-219ENST00000569136 MECP2P51608 486 aaKnown RBP7.74□□□□□ -1.17
CAPN3-219ENST00000569136 RIDAP52758 137 aaKnown RBP7.74□□□□□ -1.17
CAPN3-219ENST00000569136 DVL1P1P54792 670 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-219ENST00000569136 SNRPGP62308 76 aaKnown RBP7.74□□□□□ -1.17
CAPN3-219ENST00000569136 OR8G1Q15617 311 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 TRIP10Q15642 601 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 SNAI3Q3KNW1 292 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 TMEM155Q4W5P6 130 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 FAM57BQ71RH2 274 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 PQLC1Q8N2U9 271 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 MUC20Q8N307 709 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-219ENST00000569136 KLHL36Q8N4N3 616 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 CBR4Q8N4T8 237 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 LINC00482Q8N8I6 264 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 OR2T27Q8NH04 317 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 Q8TCH9 128 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 REEP6Q96HR9 211 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 Q96MT0 163 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 SHARPINQ9H0F6 387 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 ZNF665Q9H7R5 613 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 FN3KRPQ9HA64 309 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 C8orf4Q9NR00 106 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 C14orf119Q9NWQ9 140 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 CLN6Q9NWW5 311 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 IMPAD1Q9NX62 359 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.74□□□□□ -1.17
CAPN3-219ENST00000569136 PCDHGB1Q9Y5G3 927 aa7.74□□□□□ -1.17
CAPN3-219ENST00000569136 A0A0U1RQV5 110 aa7.73□□□□□ -1.17
CAPN3-219ENST00000569136 ZNF670-ZNF695F2Z2N8 137 aa7.73□□□□□ -1.17
CAPN3-219ENST00000569136 F5H5P2 479 aa7.73□□□□□ -1.17
CAPN3-219ENST00000569136 SULT1C4O75897 302 aa7.73□□□□□ -1.17
CAPN3-219ENST00000569136 PTBP3O95758 552 aaKnown RBP7.73□□□□□ -1.17
CAPN3-219ENST00000569136 MSMBP08118 114 aa7.73□□□□□ -1.17
CAPN3-219ENST00000569136 SLC2A1P11166 492 aa7.73□□□□□ -1.17
CAPN3-219ENST00000569136 GATA3P23771 443 aa7.73□□□□□ -1.17
CAPN3-219ENST00000569136 GNALP38405 381 aa7.73□□□□□ -1.17
CAPN3-219ENST00000569136 MDH2P40926 338 aaKnown RBP7.73□□□□□ -1.17
CAPN3-219ENST00000569136 HCCSP53701 268 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms