RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 CYP3A43Q9HB55 503 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 RBFOX1Q9NWB1 397 aaKnown RBP2.45□□□□□ -2.02
CHD9-215ENST00000565442 ADA2Q9NZK5 511 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 PEF1Q9UBV8 284 aaKnown RBP2.45□□□□□ -2.02
CHD9-215ENST00000565442 FARSAQ9Y285 508 aaKnown RBP2.45□□□□□ -2.02
CHD9-215ENST00000565442 CBY1Q9Y3M2 126 aa2.45□□□□□ -2.02
CHD9-215ENST00000565442 A8MUU9 505 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 POLR1CO15160 346 aaPredicted RBP2.44□□□□□ -2.02
CHD9-215ENST00000565442 CTNSO60931 367 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 CDRT1O95170 752 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 CYB5R3P00387 301 aaPredicted RBP2.44□□□□□ -2.02
CHD9-215ENST00000565442 DCNP07585 359 aaKnown RBP2.44□□□□□ -2.02
CHD9-215ENST00000565442 PEX19P40855 299 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 OR2B8PP59922 312 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 YWHAEP62258 255 aaKnown RBP2.44□□□□□ -2.02
CHD9-215ENST00000565442 LCN2P80188 198 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 DNLZQ5SXM8 178 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 TPRG1LQ5T0D9 272 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 GUSBP11Q6P575 273 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 TMPRSS11AQ6ZMR5 421 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 GATSQ8NAP1 163 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 TEAD3Q99594 435 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 NUDT9Q9BW91 350 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 ZNF717Q9BY31 904 aaPredicted RBP2.44□□□□□ -2.02
CHD9-215ENST00000565442 RGCCQ9H4X1 137 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 REEP1Q9H902 201 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 DYRK4Q9NR20 520 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 ZMAT5Q9UDW3 170 aaKnown RBP2.44□□□□□ -2.02
CHD9-215ENST00000565442 MARCOQ9UEW3 520 aaPredicted RBP2.44□□□□□ -2.02
CHD9-215ENST00000565442 ZNF257Q9Y2Q1 563 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 SCN1AP35498 2009 aa2.44□□□□□ -2.02
CHD9-215ENST00000565442 ARPC4-TTLL3A0A0A6YYG9 625 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 A0A1B0GUH1 482 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 BTNL10A8MVZ5 291 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 HACD1B0YJ81 288 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 M0R1X1 148 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 LGALS9O00182 355 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 MANBAO00462 879 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 HSPD1P10809 573 aaKnown RBP2.43□□□□□ -2.02
CHD9-215ENST00000565442 CELP19835 753 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 APLNRP35414 380 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 OR1G1P47890 313 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 UBE2E1P51965 193 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 CLDN6P56747 220 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 NAB1Q13506 487 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 WDR43Q15061 677 aaKnown RBP eCLIP2.43□□□□□ -2.02
CHD9-215ENST00000565442 OR1Q1Q15612 314 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 ULK3Q6PHR2 472 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 Q6ZSR6 202 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 SLC30A8Q8IWU4 369 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 ZNF101Q8IZC7 436 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 DRAM1Q8N682 238 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 TMEM105Q8N8V8 129 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 FAM184AQ8NB25 1140 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 DCAKDQ8WVC6 231 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 RXFP2Q8WXD0 754 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 CPNE4Q96A23 557 aaPredicted RBP2.43□□□□□ -2.02
CHD9-215ENST00000565442 TMEM159Q96B96 161 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 UBE2E2Q96LR5 201 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 LRRC42Q9Y546 428 aa2.43□□□□□ -2.02
CHD9-215ENST00000565442 COL27A1Q8IZC6 1860 aaPredicted RBP2.42□□□□□ -2.02
CHD9-215ENST00000565442 A0A0A6YYD5 115 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 LOC100653049A0A140TA62 436 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 H3BN98 237 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 GATBO75879 557 aaKnown RBP2.42□□□□□ -2.02
CHD9-215ENST00000565442 KRT34O76011 436 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 TRBV12-3P01733 135 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 RPN2P04844 631 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 CD5P06127 495 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 THRAP10827 490 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 GFAPP14136 432 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 SRMP19623 302 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 PRKACBP22694 351 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 PCK1P35558 622 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 CFHR2P36980 270 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 CMC4P56277 68 aaPredicted RBP2.42□□□□□ -2.02
CHD9-215ENST00000565442 PAFAH1B2P68402 229 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 HADHQ16836 314 aaKnown RBP2.42□□□□□ -2.02
CHD9-215ENST00000565442 C6orf99Q4VX62 202 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 TMEM236Q5W0B7 351 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 KDM4DQ6B0I6 523 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 LINC00336Q6ZUF6 198 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 ERO1BQ86YB8 467 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 WDR31Q8NA23 367 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 OR5T3Q8NGG3 340 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 ZNF721Q8TF20 911 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 MARVELD1Q9BSK0 173 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 CHCHD7Q9BUK0 85 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 OSBPL11Q9BXB4 747 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 IL22Q9GZX6 179 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 CES1P1Q9UKY3 287 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 WIF1Q9Y5W5 379 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 GPR179Q6PRD1 2367 aa2.42□□□□□ -2.02
CHD9-215ENST00000565442 COL1A2P08123 1366 aa2.41□□□□□ -2.02
CHD9-215ENST00000565442 A0A0B4J2E0 115 aa2.41□□□□□ -2.02
CHD9-215ENST00000565442 IGHV1-3A0A0C4DH29 117 aa2.41□□□□□ -2.02
CHD9-215ENST00000565442 TRDMT1O14717 391 aaKnown RBP2.41□□□□□ -2.02
CHD9-215ENST00000565442 PTTG1O95997 202 aa2.41□□□□□ -2.02
CHD9-215ENST00000565442 PTHP01270 115 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms