RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TMEM236Q5W0B7 351 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 FIP1L1Q6UN15 594 aaKnown RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 CD300LDQ6UXZ3 194 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 Q6YL49 198 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 C9orf139Q6ZV77 190 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 SLC36A1Q7Z2H8 476 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 KRT77Q7Z794 578 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 TMEM179BQ7Z7N9 219 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 SPATA24Q86W54 205 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 FAM90A1Q86YD7 464 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 CPOQ8IVL8 374 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 C11orf53Q8IXP5 236 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 FTMTQ8N4E7 242 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 KIR3DL3Q8N743 410 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 ZNF454Q8N9F8 522 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 CSNK2A3Q8NEV1 391 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 OR1M1Q8NGA1 313 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 TBC1D15Q8TC07 691 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 RNF133Q8WVZ7 376 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 GATAD2BQ8WXI9 593 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 H1FXQ92522 213 aaKnown RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 LHX4Q969G2 390 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 SPSB4Q96A44 273 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 SEH1LQ96EE3 360 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 RNF170Q96K19 258 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 FAM71F1Q96KD3 344 aaPredicted RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 AMELYQ99218 206 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 PAPOLGQ9BWT3 736 aaKnown RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 YY1AP1Q9H869 796 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 BEX1Q9HBH7 125 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 ACOXLQ9NUZ1 547 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 H2AFY2Q9P0M6 372 aaPredicted RBP5.32□□□□□ -1.56
TCF4-228ENST00000565393 ZNF319Q9P2F9 582 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 ONECUT1Q9UBC0 465 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 DNAJB11Q9UBS4 358 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 LAMP5Q9UJQ1 280 aa5.32□□□□□ -1.56
TCF4-228ENST00000565393 RTTNQ86VV8 2226 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 IGHV1-69DA0A0B4J2H0 117 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 AQP12BA6NM10 295 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 SRRM5B3KS81 715 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 PSMD9O00233 223 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 ACOT8O14734 319 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 GSC2O15499 205 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 SELENOFO60613 162 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 TIPRLO75663 272 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 KNG1P01042 644 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 IGHV1-69P01742 117 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 ANXA8P13928 327 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 MUC1P15941 1255 aaPredicted RBP5.31□□□□□ -1.56
TCF4-228ENST00000565393 MDKP21741 143 aaPredicted RBP5.31□□□□□ -1.56
TCF4-228ENST00000565393 OPRL1P41146 370 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 CSNK2BP67870 215 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 ELF3P78545 371 aaPredicted RBP5.31□□□□□ -1.56
TCF4-228ENST00000565393 CBX1P83916 185 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 PRDX4Q13162 271 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 SNAPC1Q16533 368 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 TUSC1Q2TAM9 212 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 LRRC10Q5BKY1 277 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 WDR38Q5JTN6 314 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 TEX36Q5VZQ5 186 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 WDR82Q6UXN9 313 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 C17orf107Q6ZR85 190 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 MOB3CQ70IA8 216 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 RHOUQ7L0Q8 258 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 COMMD2Q86X83 199 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 AQP12AQ8IXF9 295 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 ADGRG5Q8IZF4 528 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 CMTM4Q8IZR5 234 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 HS3ST5Q8IZT8 346 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 GALNT4Q8N4A0 578 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 OTOSQ8NHW6 89 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 FAM81AQ8TBF8 368 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 OR5P3Q8WZ94 311 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 RPL3LQ92901 407 aaKnown RBP5.31□□□□□ -1.56
TCF4-228ENST00000565393 DACT3Q96B18 629 aaPredicted RBP5.31□□□□□ -1.56
TCF4-228ENST00000565393 MED30Q96HR3 178 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 TBX15Q96SF7 602 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 RTL8AQ9BWD3 113 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 CHIAQ9BZP6 476 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 C1orf21Q9H246 121 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 RGCCQ9H4X1 137 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 SMURF1Q9HCE7 757 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 SNTG1Q9NSN8 517 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 HAO2Q9NYQ3 351 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 TVP23BQ9NYZ1 205 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 KAAG1Q9UBP8 84 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 ZNF391Q9UJN7 358 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 CAB39Q9Y376 341 aaPredicted RBP5.31□□□□□ -1.56
TCF4-228ENST00000565393 MPC1Q9Y5U8 109 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 TLN2Q9Y4G6 2542 aa5.31□□□□□ -1.56
TCF4-228ENST00000565393 PLCE1Q9P212 2302 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 A0A0U1RQK1 487 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 hCG_38984A0A1B0GV85 526 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 TMEM269A0A1B0GVZ9 245 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 A0A1W2PRD5 423 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 A0A1W2PRF3 423 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 A0A1W2PRM7 423 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 ARRDC5A6NEK1 342 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 ZNF732B4DXR9 585 aa5.3□□□□□ -1.56
TCF4-228ENST00000565393 GPR37O15354 613 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms