RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 MRPS28Q9Y2Q9 187 aaKnown RBP16.95■□□□□ 0.3
CLN6-205ENST00000564846 DOCK7Q96N67 2140 aa16.95■□□□□ 0.3
CLN6-205ENST00000564846 LYRM1O43325 122 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 SSX4O60224 188 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 PFDN1O60925 122 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 UBBP0CG47 229 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 HOXC12P31275 282 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 QRFPP83859 136 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 LINC00303Q3SY05 128 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 BEND4Q6ZU67 534 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 OR2W3Q7Z3T1 314 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 BIVMQ86UB2 503 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 TOMM5Q8N4H5 51 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 ZNF610Q8N9Z0 462 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 SLC30A7Q8NEW0 376 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 FCAMRQ8WWV6 532 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 CPNE2Q96FN4 548 aaPredicted RBP16.94■□□□□ 0.3
CLN6-205ENST00000564846 REPIN1Q9BWE0 567 aaKnown RBP16.94■□□□□ 0.3
CLN6-205ENST00000564846 GHRLQ9UBU3 117 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 FUOMA2VDF0 154 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 METTL21EPA6NDL7 271 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 GMDSO60547 372 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 ZNF14P17017 642 aaPredicted RBP16.94■□□□□ 0.3
CLN6-205ENST00000564846 PRKACBP22694 351 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 PMPCAQ10713 525 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 TBC1D28Q2M2D7 210 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 GLIPR1L1Q6UWM5 242 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 C17orf78Q8N4C9 275 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 ITPKCQ96DU7 683 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 ZC3HAV1LQ96H79 300 aaKnown RBP16.94■□□□□ 0.3
CLN6-205ENST00000564846 MS4A3Q96HJ5 214 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 TECTBQ96PL2 329 aa16.94■□□□□ 0.3
CLN6-205ENST00000564846 RTTNQ86VV8 2226 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 SPENQ96T58 3664 aaKnown RBP16.93■□□□□ 0.3
CLN6-205ENST00000564846 PRRC2CQ9Y520 2896 aaKnown RBP16.93■□□□□ 0.3
CLN6-205ENST00000564846 ZNF816-ZNF321PA0A0X1KG74 233 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 PRRG2O14669 202 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 KDM4BO94953 1096 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 VSIG8P0DPA2 414 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 OR3A4PP47883 348 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 RNASE12Q5GAN4 147 aaKnown RBP16.93■□□□□ 0.3
CLN6-205ENST00000564846 OR10K2Q6IF99 312 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 RAB12Q6IQ22 244 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 RNF144BQ7Z419 303 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 ZNF101Q8IZC7 436 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 ENKURQ8TC29 256 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 TP63Q9H3D4 680 aaPredicted RBP16.93■□□□□ 0.3
CLN6-205ENST00000564846 AUNIPQ9H7T9 357 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 GPR173Q9NS66 373 aa16.93■□□□□ 0.3
CLN6-205ENST00000564846 MYEF2Q9P2K5 600 aaKnown RBP16.93■□□□□ 0.3
CLN6-205ENST00000564846 TRAV18A0A075B6X5 111 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 TMEM14DPA8MWL7 114 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 J3QW42 95 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 SCGNO76038 276 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 GDNFP39905 211 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 ALDH3B1P43353 468 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 BCAP31P51572 246 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 MRPL49Q13405 166 aaKnown RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 UNC119Q13432 240 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 GK2Q14410 553 aaPredicted RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 DNM1P46Q6ZS02 220 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 KRT74Q7RTS7 529 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 MRPL21Q7Z2W9 205 aaKnown RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 PAQR4Q8N4S7 273 aaPredicted RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 OR52I2Q8NH67 350 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 NPRL2Q8WTW4 380 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 SNRNP40Q96DI7 357 aaKnown RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 NEDD4LQ96PU5 975 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 SFXN3Q9BWM7 321 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 OPN3Q9H1Y3 402 aaPredicted RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 KCNN3Q9UGI6 736 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 SPTBN4Q9H254 2564 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 PTPRQQ9UMZ3 2332 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 CENPXA8MT69 81 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 ORC5O43913 435 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 ECDO95905 644 aaPredicted RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 NRASP01111 189 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 CEACAM8P31997 349 aaPredicted RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 PTGFRP43088 359 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 FAM189A2Q15884 450 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 RPRMLQ8N4K4 120 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 NAXEQ8NCW5 288 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 OR5L1Q8NGL2 311 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 KCNG3Q8TAE7 436 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 FAM46BQ96A09 425 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 OBP2BQ9NPH6 170 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 STARD10Q9Y365 291 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 RBMX2Q9Y388 322 aaKnown RBP16.92■□□□□ 0.3
CLN6-205ENST00000564846 CACNG2Q9Y698 323 aa16.92■□□□□ 0.3
CLN6-205ENST00000564846 NGFP01138 241 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 NAT2P11245 290 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 CBR1P16152 277 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 WNT5AP41221 380 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 KIR2DL3P43628 341 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 AP3S2P59780 193 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 CRIP3Q6Q6R5 217 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 GFRALQ6UXV0 394 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 CXorf67Q86X51 503 aaPredicted RBP16.91■□□□□ 0.3
CLN6-205ENST00000564846 DUSP18Q8NEJ0 188 aa16.91■□□□□ 0.3
CLN6-205ENST00000564846 UBASH3BQ8TF42 649 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms