RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ANKRD12Q6UB98 2062 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 SHROOM3Q8TF72 1996 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 MGAT4DA6NG13 374 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 E7EWF7 191 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 H7C0C1 242 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 PRMT5O14744 637 aaPredicted RBP2.12□□□□□ -2.07
UBR1-205ENST00000564540 NUPL2O15504 423 aaKnown RBP2.12□□□□□ -2.07
UBR1-205ENST00000564540 RAD51CO43502 376 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 CALUO43852 315 aaPredicted RBP2.12□□□□□ -2.07
UBR1-205ENST00000564540 SCN2BO60939 215 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 LCA5LO95447 670 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 CCNE2O96020 404 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 RPN2P04844 631 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 ARG1P05089 322 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 TPM3P06753 285 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 ZNF3P17036 446 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 CSNK2A2P19784 350 aaPredicted RBP2.12□□□□□ -2.07
UBR1-205ENST00000564540 RAB4AP20338 218 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 HRH1P35367 487 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 OR2B6P58173 313 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 SKP1P63208 163 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 MXD1Q05195 221 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 PMS2P3Q13401 168 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 C5orf64Q2M2E5 130 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 PTPN20Q4JDL3 420 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 SMUG1Q53HV7 270 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 TMEM150AQ86TG1 271 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 VKORC1L1Q8N0U8 176 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 C17orf78Q8N4C9 275 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 LINC00469Q8N7U9 141 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 OR5AR1Q8NGP9 310 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 OR2A1Q8NGT9 310 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 DDI1Q8WTU0 396 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 CCDC124Q96CT7 223 aaKnown RBP2.12□□□□□ -2.07
UBR1-205ENST00000564540 PIK3IP1Q96FE7 263 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 DYNLL2Q96FJ2 89 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 ZNF681Q96N22 645 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 SERPINB12Q96P63 405 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 SH3GL3Q99963 347 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 SLC25A2Q9BXI2 301 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 KCNJ16Q9NPI9 418 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 OR2S2Q9NQN1 319 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 MCUBQ9NWR8 336 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 NXT1Q9UKK6 140 aaKnown RBP2.12□□□□□ -2.07
UBR1-205ENST00000564540 SLC22A14Q9Y267 594 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 ST3GAL6Q9Y274 331 aa2.12□□□□□ -2.07
UBR1-205ENST00000564540 ADAMTS13Q76LX8 1427 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 A0A0B4J2A0 478 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 K7EN84 100 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 GABRPO00591 440 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 NME4O00746 187 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 NIPSNAP2O75323 286 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 AIFM1O95831 613 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 GABRG2P18507 467 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 SERPINB5P36952 375 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 OPRK1P41145 380 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 RND2P52198 227 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 NUTF2P61970 127 aaKnown RBP2.11□□□□□ -2.07
UBR1-205ENST00000564540 OR7A5Q15622 319 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 ATP6V1FQ16864 119 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 SAXO2Q658L1 398 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 C12orf54Q6X4T0 127 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 TRMT10CQ7L0Y3 403 aaKnown RBP2.11□□□□□ -2.07
UBR1-205ENST00000564540 OR7G1Q8NGA0 311 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 OR6N2Q8NGY6 317 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 LGALS14Q8TCE9 139 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 CDKL2Q92772 493 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 CREB3L1Q96BA8 519 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 FAM3DQ96BQ1 224 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 CENPNQ96H22 339 aaPredicted RBP2.11□□□□□ -2.07
UBR1-205ENST00000564540 SULT4A1Q9BR01 284 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 UTP23Q9BRU9 249 aaKnown RBP2.11□□□□□ -2.07
UBR1-205ENST00000564540 AGMATQ9BSE5 352 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 UPF3BQ9BZI7 483 aaKnown RBP2.11□□□□□ -2.07
UBR1-205ENST00000564540 SYT4Q9H2B2 425 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 ARMC7Q9H6L4 198 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 MRM3Q9HC36 420 aaKnown RBP2.11□□□□□ -2.07
UBR1-205ENST00000564540 RMND1Q9NWS8 449 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 SLC17A7Q9P2U7 560 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 SHPKQ9UHJ6 478 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 SCML1Q9UN30 329 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 CARHSP1Q9Y2V2 147 aaKnown RBP2.11□□□□□ -2.07
UBR1-205ENST00000564540 SIGLEC9Q9Y336 463 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 ATP6V1DQ9Y5K8 247 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 TSSC4Q9Y5U2 329 aaPredicted RBP2.11□□□□□ -2.07
UBR1-205ENST00000564540 AQRO60306 1485 aaKnown RBP eCLIP2.11□□□□□ -2.072e-6■■■■□ 24.5
UBR1-205ENST00000564540 AK9Q5TCS8 1911 aa2.11□□□□□ -2.07
UBR1-205ENST00000564540 SEC16AO15027 2179 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 A0A0A6YYD5 115 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 TRAV39A0A0B4J263 110 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 TVP23AA6NH52 213 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 HACD1B0YJ81 288 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 RNASEK-C17orf49H0YIS7 233 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 GCM2O75603 506 aaPredicted RBP2.1□□□□□ -2.07
UBR1-205ENST00000564540 ZMPSTE24O75844 475 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 C1GALT1C1LP0DN25 315 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 COL8A2P25067 703 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 CEACAM6P40199 344 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 CRATP43155 626 aa2.1□□□□□ -2.07
UBR1-205ENST00000564540 FABP6P51161 128 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms