RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 TMEM204Q9BSN7 226 aa12.66□□□□□ -0.38
CDH11-207ENST00000563255 CENPOQ9BU64 300 aa12.66□□□□□ -0.38
CDH11-207ENST00000563255 ZNF442Q9H7R0 627 aa12.66□□□□□ -0.38
CDH11-207ENST00000563255 NOX4Q9NPH5 578 aa12.66□□□□□ -0.38
CDH11-207ENST00000563255 RSL24D1Q9UHA3 163 aaKnown RBP12.66□□□□□ -0.38
CDH11-207ENST00000563255 RAI1Q7Z5J4 1906 aaPredicted RBP12.65□□□□□ -0.38
CDH11-207ENST00000563255 CCDC160A6NGH7 325 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 SHISA9B4DS77 424 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 H3BSH0 61 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 PIN1P1O15428 100 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 SIAH2O43255 324 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 LMX1BO60663 402 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 NOL3O60936 208 aaKnown RBP12.65□□□□□ -0.38
CDH11-207ENST00000563255 KITLGP21583 273 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 ACKR3P25106 362 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 GCH1P30793 250 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 THBS4P35443 961 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 SPATA46Q5T0L3 261 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 C22orf42Q6IC83 251 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 PP6455Q8WZ26 134 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 FGGYQ96C11 551 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 ISOC1Q96CN7 298 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 CMBLQ96DG6 245 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 KCTD7Q96MP8 289 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 PPIL3Q9H2H8 161 aaKnown RBP12.65□□□□□ -0.38
CDH11-207ENST00000563255 PLEKHA1Q9HB21 404 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 FOXJ3Q9UPW0 622 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 PIGLQ9Y2B2 252 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 RNF115Q9Y4L5 304 aa12.65□□□□□ -0.38
CDH11-207ENST00000563255 TRAV1-2A0A0B4J238 106 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 GGT3PA6NGU5 568 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 CD300LBA8K4G0 201 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 VSTM5A8MXK1 200 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 IQCF6A8MYZ5 107 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 SLC22A1O15245 554 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 ALX3O95076 343 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 ZNF20P17024 532 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 IGFBP3P17936 291 aaPredicted RBP12.64□□□□□ -0.39
CDH11-207ENST00000563255 SRMP19623 302 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 FSTP19883 344 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
CDH11-207ENST00000563255 PSG7Q13046 419 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 HSD17B12Q53GQ0 312 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 OR5D14Q8NGL3 314 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 SYNPRQ8TBG9 265 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 C12orf43Q96C57 262 aaKnown RBP12.64□□□□□ -0.39
CDH11-207ENST00000563255 ADAT3Q96EY9 351 aaPredicted RBP12.64□□□□□ -0.39
CDH11-207ENST00000563255 PIK3IP1Q96FE7 263 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 CA10Q9NS85 328 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 KCNN3Q9UGI6 736 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 ATP23Q9Y6H3 246 aa12.64□□□□□ -0.39
CDH11-207ENST00000563255 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 ZNF816-ZNF321PA0A0X1KG74 233 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 A0A1W2PPK0 400 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 H3BMQ9 156 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 CST4P01036 141 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 IGHV3-13P01766 116 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 CALRP27797 417 aaKnown RBP12.63□□□□□ -0.39
CDH11-207ENST00000563255 MPV17P39210 176 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 MTNR1BP49286 362 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 FABP6P51161 128 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 VBP1P61758 197 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 NCS1P62166 190 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 FAM27D1Q5T7N8 215 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 FOXB2Q5VYV0 432 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 TMEM42Q69YG0 159 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 OR2T2Q6IF00 324 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 ADAM5Q6NVV9 412 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 ZNF529Q6P280 563 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 UTS2BQ765I0 119 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 TPRA1Q86W33 373 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 FTMTQ8N4E7 242 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 KBTBD8Q8NFY9 601 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 OR56B2PQ8NGI1 322 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 MRPL24Q96A35 216 aaKnown RBP12.63□□□□□ -0.39
CDH11-207ENST00000563255 ZCCHC4Q9H5U6 513 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 RNF167Q9H6Y7 350 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 TCF7L1Q9HCS4 588 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 CKLFQ9UBR5 152 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
CDH11-207ENST00000563255 POU2F3Q9UKI9 436 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 CMAHPQ9Y471 501 aa12.63□□□□□ -0.39
CDH11-207ENST00000563255 ANKHD1Q8IWZ3 2542 aaKnown RBP12.62□□□□□ -0.39
CDH11-207ENST00000563255 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 FAHP16930 419 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 MYL9P24844 172 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 TGFBR1P36897 503 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 GNALP38405 381 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 PRSS12P56730 875 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 MSMPQ1L6U9 139 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 CLVS2Q5SYC1 327 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 ASPHD2Q6ICH7 369 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 USP43Q70EL4 1123 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 TMEM200AQ86VY9 491 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 PIGTQ969N2 578 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 TECTBQ96PL2 329 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 HS3ST6Q96QI5 342 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 CHST5Q9GZS9 411 aa12.62□□□□□ -0.39
CDH11-207ENST00000563255 SLITRK2Q9H156 845 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms