RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CDK2P24941 298 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 WNT5AP41221 380 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 NR4A2P43354 598 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 RFX2P48378 723 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 KCNJ8Q15842 424 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 EIF2S3LQ2VIR3 472 aaKnown RBP15.62■□□□□ 0.09
COMMD4-208ENST00000563220 CRIP3Q6Q6R5 217 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 NRARPQ7Z6K4 114 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 CELF2-AS1Q8N7Q2 184 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 AKAP1Q92667 903 aaKnown RBP eCLIP15.62■□□□□ 0.09
COMMD4-208ENST00000563220 ZFP3Q96NJ6 502 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 TP63Q9H3D4 680 aaPredicted RBP15.62■□□□□ 0.09
COMMD4-208ENST00000563220 MOV10Q9HCE1 1003 aaKnown RBP15.62■□□□□ 0.09
COMMD4-208ENST00000563220 LANCL1O43813 399 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 ALX3O95076 343 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 HCKP08631 526 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 PRF1P14222 555 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 HOXB1P14653 301 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-208ENST00000563220 MAP2K3P46734 347 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 OR10K2Q6IF99 312 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 ZNF474Q6S9Z5 364 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-208ENST00000563220 ZNF101Q8IZC7 436 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 C1orf162Q8NEQ5 155 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-208ENST00000563220 SLC30A7Q8NEW0 376 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 NPRL2Q8WTW4 380 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 APOBEC3DQ96AK3 386 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-208ENST00000563220 GPR173Q9NS66 373 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 TINAGQ9UJW2 476 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 CHD8Q9HCK8 2581 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 ZZEF1O43149 2961 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 CTAG2O75638 210 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 HLA-DQB1P01920 261 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 PTH2RP49190 550 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 P2RY6Q15077 328 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 OR8B8Q15620 311 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 BEND4Q6ZU67 534 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 ANGPTL5Q86XS5 388 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 CDH26Q8IXH8 852 aa15.61■□□□□ 0.09
COMMD4-208ENST00000563220 THAP7Q9BT49 309 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-208ENST00000563220 REPIN1Q9BWE0 567 aaKnown RBP15.61■□□□□ 0.09
COMMD4-208ENST00000563220 CACNA1AO00555 2505 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 TLN1Q9Y490 2541 aaKnown RBP15.6■□□□□ 0.09
COMMD4-208ENST00000563220 MED19A0JLT2 244 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-208ENST00000563220 PLA2G10O15496 165 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 SSX4O60224 188 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 GMDSO60547 372 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 TRAPPC2P0DI81 140 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 TRAPPC2BP0DI82 140 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 PMPCAQ10713 525 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 GK2Q14410 553 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-208ENST00000563220 TRIQKQ629K1 86 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 BAIAP2L2Q6UXY1 529 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 C1QTNF6Q9BXI9 259 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 SLC22A4Q9H015 551 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 POFUT1Q9H488 388 aa15.6■□□□□ 0.09
COMMD4-208ENST00000563220 INTS1Q8N201 2190 aaKnown RBP15.6■□□□□ 0.09
COMMD4-208ENST00000563220 EEF1E1O43324 174 aaKnown RBP15.59■□□□□ 0.09
COMMD4-208ENST00000563220 KDM4BO94953 1096 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 AGFG2O95081 481 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 OR3A4PP47883 348 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 MMP15P51511 669 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 IDH3GP51553 393 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-208ENST00000563220 QRFPP83859 136 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 DGCR2P98153 550 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 PITPNAQ00169 270 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 HLXQ14774 488 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-208ENST00000563220 TMEM42Q69YG0 159 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 TRIM63Q969Q1 353 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 SFXN3Q9BWM7 321 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 PRORYQ9H606 182 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 PTHLHP12272 177 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 CBR1P16152 277 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 KISS1Q15726 138 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 RNASE12Q5GAN4 147 aaKnown RBP15.59■□□□□ 0.09
COMMD4-208ENST00000563220 TMEM69Q5SWH9 247 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 MTFR2Q6P444 385 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 BHLHA15Q7RTS1 189 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-208ENST00000563220 C19orf18Q8NEA5 215 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 GCDHQ92947 438 aaPredicted RBP15.59■□□□□ 0.09
COMMD4-208ENST00000563220 PIGTQ969N2 578 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 RFT1Q96AA3 541 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 PTTG3PQ9NZH4 202 aa15.59■□□□□ 0.09
COMMD4-208ENST00000563220 CTDSPLO15194 276 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 XRCC3O43542 346 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 CD3GP09693 182 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 VSIG8P0DPA2 414 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 PLA2G5P39877 138 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 TAS2R20P59543 309 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 KLRB1Q12918 225 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 UNC119Q13432 240 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 TBC1D28Q2M2D7 210 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 CLVS2Q5SYC1 327 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 AWAT2Q6E213 333 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 GLIPR1L1Q6UWM5 242 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 YIPF5Q969M3 257 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 C1orf147Q96MC9 270 aaPredicted RBP15.58■□□□□ 0.08
COMMD4-208ENST00000563220 NEDD4LQ96PU5 975 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 GPER1Q99527 375 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 GAL3ST1Q99999 423 aa15.58■□□□□ 0.08
COMMD4-208ENST00000563220 C11orf54Q9H0W9 315 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms