RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 TMEM38BQ9NVV0 291 aa11.36□□□□□ -0.59
SPG7-207ENST00000563218 DUSP13Q9UII6 198 aa11.36□□□□□ -0.59
SPG7-207ENST00000563218 SSR3Q9UNL2 185 aa11.36□□□□□ -0.59
SPG7-207ENST00000563218 GRIP1Q9Y3R0 1128 aa11.36□□□□□ -0.59
SPG7-207ENST00000563218 LHFPL6Q9Y693 200 aa11.36□□□□□ -0.59
SPG7-207ENST00000563218 TRBV2A0A0J9YWF9 115 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 A0A1W2PPW3 197 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 PLPP2O43688 288 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 CDC14BO60729 498 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 ABHD16AO95870 558 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 H2BFMP0C1H6 154 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 FAM157BP0CG42 384 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 ADRA2CP18825 462 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 VBP1P61758 197 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 RPS25P62851 125 aaKnown RBP11.35□□□□□ -0.59
SPG7-207ENST00000563218 SLC3A1Q07837 685 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 AQP6Q13520 282 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 CDK5R1Q15078 307 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 TRAM1Q15629 374 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 FAM27BQ5VT28 67 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 DMKNQ6E0U4 476 aaPredicted RBP11.35□□□□□ -0.59
SPG7-207ENST00000563218 DEGS2Q6QHC5 323 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 SKA3Q8IX90 412 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 RNF133Q8WVZ7 376 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 TMEM203Q969S6 136 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 SLAMF6Q96DU3 332 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 TMED9Q9BVK6 235 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 ZNF416Q9BWM5 594 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 KCNN2Q9H2S1 579 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 SIAEQ9HAT2 523 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 ESM1Q9NQ30 184 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 ASH2LQ9UBL3 628 aa11.35□□□□□ -0.59
SPG7-207ENST00000563218 SF3B6Q9Y3B4 125 aaKnown RBP11.35□□□□□ -0.59
SPG7-207ENST00000563218 SIRT4Q9Y6E7 314 aaPredicted RBP11.35□□□□□ -0.59
SPG7-207ENST00000563218 A0A0A6YYJ9 748 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 TMEM89A2RUT3 159 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 ZNF878C9JN71 531 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 GPX5O75715 221 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 FARS2O95363 451 aaKnown RBP11.34□□□□□ -0.59
SPG7-207ENST00000563218 HLA-DPB1P04440 258 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 CST2P09228 141 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 EPHA1P21709 976 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 CRYBB2P43320 205 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 COMPP49747 757 aaPredicted RBP11.34□□□□□ -0.59
SPG7-207ENST00000563218 GDI2P50395 445 aaKnown RBP11.34□□□□□ -0.59
SPG7-207ENST00000563218 NCS1P62166 190 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 GALK2Q01415 458 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 ALKBH1Q13686 389 aaKnown RBP11.34□□□□□ -0.59
SPG7-207ENST00000563218 ENDOGQ14249 297 aaKnown RBP11.34□□□□□ -0.59
SPG7-207ENST00000563218 TAF13Q15543 124 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 NRN1LQ496H8 165 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 TMEM255AQ5JRV8 349 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 FAHD2BQ6P2I3 314 aaPredicted RBP11.34□□□□□ -0.59
SPG7-207ENST00000563218 CFAP77Q6ZQR2 320 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 PEG10Q86TG7 708 aaKnown RBP11.34□□□□□ -0.59
SPG7-207ENST00000563218 LRRC18Q8N456 261 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 GJC3Q8NFK1 279 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 OR51F2Q8NH61 342 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 ZFAND2BQ8WV99 257 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 SMIM19Q96E16 107 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 FAHD2AQ96GK7 314 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 MAP6Q96JE9 813 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 COQ7Q99807 217 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 SH3GL3Q99963 347 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 TMPRSS13Q9BYE2 586 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 MS4A5Q9H3V2 200 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 PTTG2Q9NZH5 202 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 TAAR3PQ9P1P4 343 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 PCDHB10Q9UN67 800 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 LRP12Q9Y561 859 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 CACNG2Q9Y698 323 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 MGAM2Q2M2H8 2515 aa11.34□□□□□ -0.59
SPG7-207ENST00000563218 TRDV1A0A1B0GX56 115 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 UBL3O95164 117 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 PNPP00491 289 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 CD1AP06126 327 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 GALP22466 123 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 RBMXP38159 391 aaKnown RBP11.33□□□□□ -0.6
SPG7-207ENST00000563218 OPRL1P41146 370 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 HILS1P60008 231 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 PCBD1P61457 104 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 RPS23P62266 143 aaKnown RBP11.33□□□□□ -0.6
SPG7-207ENST00000563218 CCL8P80075 99 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 SPCS2Q15005 226 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 USP43Q70EL4 1123 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 RHOUQ7L0Q8 258 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 ALDH16A1Q8IZ83 802 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 SLC22A24Q8N4F4 322 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 ZNF418Q8TF45 676 aaPredicted RBP11.33□□□□□ -0.6
SPG7-207ENST00000563218 GHSRQ92847 366 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 SLC6A7Q99884 636 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 CENPOQ9BU64 300 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 ZNF665Q9H7R5 613 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 NIPAL2Q9H841 368 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 GSTK1Q9Y2Q3 226 aa11.33□□□□□ -0.6
SPG7-207ENST00000563218 TRAV20A0A0B4J274 112 aa11.32□□□□□ -0.6
SPG7-207ENST00000563218 C17orf100A8MU93 164 aa11.32□□□□□ -0.6
SPG7-207ENST00000563218 VGLL3A8MV65 326 aa11.32□□□□□ -0.6
SPG7-207ENST00000563218 GABRPO00591 440 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms