RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CLIC3O95833 236 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 PNPP00491 289 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 OR2T7P0C7T2 308 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 PPIAL4FP0DN26 164 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 RPS2P15880 293 aaKnown RBP8.52□□□□□ -1.05
HERC1-212ENST00000561348 ZNF19P17023 458 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 PMELP40967 661 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 MAP2K3P46734 347 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 LMO4P61968 165 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 CEP78Q5JTW2 689 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 MEDAGQ5VYS4 303 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 DEGS2Q6QHC5 323 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 MOB3CQ70IA8 216 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 PRSS45Q7RTY3 260 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 LHFPL3Q86UP9 236 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 ENTHD1Q8IYW4 607 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 SPICQ8N5J4 248 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 OR2T27Q8NH04 317 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 SPSB4Q96A44 273 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 TMEM186Q96B77 213 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 POM121Q96HA1 1249 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 RNF170Q96K19 258 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 LYZL4Q96KX0 146 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 Q96MT0 163 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 MNTQ99583 582 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 RGCCQ9H4X1 137 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 METTL17Q9H7H0 456 aaPredicted RBP8.52□□□□□ -1.05
HERC1-212ENST00000561348 FAM206AQ9NX38 181 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 RNF7Q9UBF6 113 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 MRM2Q9UI43 246 aaKnown RBP8.52□□□□□ -1.05
HERC1-212ENST00000561348 SLC22A13Q9Y226 551 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 PIGLQ9Y2B2 252 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 PPIAL4AQ9Y536 164 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 R4GMQ9 66 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 TANC2Q9HCD6 1990 aa8.52□□□□□ -1.05
HERC1-212ENST00000561348 PHF1O43189 567 aaPredicted RBP8.51□□□□□ -1.05
HERC1-212ENST00000561348 IGHV2-70P01814 119 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 IGHV2-5P01817 119 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 FAHP16930 419 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 SRD5A1P18405 259 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 ACKR3P25106 362 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 MDH2P40926 338 aaKnown RBP8.51□□□□□ -1.05
HERC1-212ENST00000561348 CD200P41217 278 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 SEC61A1P61619 476 aaKnown RBP8.51□□□□□ -1.05
HERC1-212ENST00000561348 SNRPGP62308 76 aaKnown RBP8.51□□□□□ -1.05
HERC1-212ENST00000561348 CSNK2BP67870 215 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 ROM1Q03395 351 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 EGR3Q06889 387 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 RIPPLY1Q0D2K3 151 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 SNCBQ16143 134 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 ESCO2Q56NI9 601 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 LIPNQ5VXI9 398 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 PLCXD3Q63HM9 321 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 ZDHHC23Q8IYP9 409 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 MUC20Q8N307 709 aaPredicted RBP8.51□□□□□ -1.05
HERC1-212ENST00000561348 SPERTQ8NA61 448 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 SEMA6DQ8NFY4 1073 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 LRRC29Q8WV35 223 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 RPL3LQ92901 407 aaKnown RBP8.51□□□□□ -1.05
HERC1-212ENST00000561348 RTL8AQ9BWD3 113 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 PLEKHA1Q9HB21 404 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 ACOXLQ9NUZ1 547 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 HAO2Q9NYQ3 351 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 CDC42EP3Q9UKI2 254 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 SNX5Q9Y5X3 404 aa8.51□□□□□ -1.05
HERC1-212ENST00000561348 ARHGAP32A7KAX9 2087 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 NAV3Q8IVL0 2385 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 NSD1Q96L73 2696 aaPredicted RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 ZNF816-ZNF321PA0A0X1KG74 233 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 A0A1B0GVI7 797 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 CEACAM18A8MTB9 384 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 IFNL4K9M1U5 179 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 CDIPTO14735 213 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 MPZL2O60487 215 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 MTRF1O75570 445 aaKnown RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 INMTO95050 263 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 TTRP02766 147 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 DBTP11182 482 aaKnown RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 GPM6AP51674 278 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 DVL1P1P54792 670 aaPredicted RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 GNB2P62879 340 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 ELF3P78545 371 aaPredicted RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 ZNF85Q03923 595 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 ZNF91Q05481 1191 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 TMED1Q13445 227 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 OCLNQ16625 522 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 SMN1Q16637 294 aaKnown RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 DCAF12L2Q5VW00 463 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 LRRC28Q86X40 367 aaPredicted RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 BATF2Q8N1L9 274 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 DHRSXQ8N5I4 330 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 CNIH3Q8TBE1 160 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 TRMT10AQ8TBZ6 339 aaKnown RBP8.5□□□□□ -1.05
HERC1-212ENST00000561348 NPRL2Q8WTW4 380 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 LGALS12Q96DT0 336 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 TECTBQ96PL2 329 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 TMEM246Q9BRR3 403 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 VCXQ9H320 206 aa8.5□□□□□ -1.05
HERC1-212ENST00000561348 PATZ1Q9HBE1 687 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms