RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 AWAT2Q6E213 333 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 ANGPTL5Q86XS5 388 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 PIGTQ969N2 578 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 ITPKCQ96DU7 683 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 NUDT16L1Q9BRJ7 211 aaKnown RBP14.83□□□□□ -0.04
HDDC3-206ENST00000561036 C11orf54Q9H0W9 315 aaPredicted RBP14.83□□□□□ -0.04
HDDC3-206ENST00000561036 ATG5Q9H1Y0 275 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 MOV10Q9HCE1 1003 aaKnown RBP14.83□□□□□ -0.04
HDDC3-206ENST00000561036 MRPS28Q9Y2Q9 187 aaKnown RBP14.83□□□□□ -0.04
HDDC3-206ENST00000561036 SPTBN2O15020 2390 aa14.83□□□□□ -0.04
HDDC3-206ENST00000561036 GMDSO60547 372 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 GLI4P10075 376 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 CCNOP22674 350 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 RFX2P48378 723 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 DGCR2P98153 550 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 PLA2G7Q13093 441 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 ZNF57Q68EA5 555 aaPredicted RBP14.82□□□□□ -0.04
HDDC3-206ENST00000561036 GFRALQ6UXV0 394 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 DNM1P46Q6ZS02 220 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 IZUMO1Q8IYV9 350 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 FAM169BQ8N8A8 192 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 CSNK2A3Q8NEV1 391 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 KCNG3Q8TAE7 436 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 FCAMRQ8WWV6 532 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 SNRNP40Q96DI7 357 aaKnown RBP14.82□□□□□ -0.04
HDDC3-206ENST00000561036 ZC3HAV1LQ96H79 300 aaKnown RBP14.82□□□□□ -0.04
HDDC3-206ENST00000561036 GPER1Q99527 375 aa14.82□□□□□ -0.04
HDDC3-206ENST00000561036 C7orf50Q9BRJ6 194 aaKnown RBP14.82□□□□□ -0.04
HDDC3-206ENST00000561036 hCG_2014768A0A024R1R8 64 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 TMEM14DPA8MWL7 114 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 LYRM1O43325 122 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 NRASP01111 189 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 NAT2P11245 290 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 PTGFRP43088 359 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 RBPJQ06330 500 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 PMPCAQ10713 525 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 GK2Q14410 553 aaPredicted RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 GLIPR1L1Q6UWM5 242 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 CCBE1Q6UXH8 406 aaPredicted RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 UNQ6494/PRO21346Q6UXR6 183 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 LHFPL2Q6ZUX7 228 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 BHLHA15Q7RTS1 189 aaPredicted RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 MRPL21Q7Z2W9 205 aaKnown RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 NRARPQ7Z6K4 114 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 CXorf67Q86X51 503 aaPredicted RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 DOLPP1Q86YN1 238 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 WDR31Q8NA23 367 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 OPN3Q9H1Y3 402 aaPredicted RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 PIGMQ9H3S5 423 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 GPR173Q9NS66 373 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 RBFOX1Q9NWB1 397 aaKnown RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 EIF3KQ9UBQ5 218 aaKnown RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 KCNN3Q9UGI6 736 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 AMDHD2Q9Y303 409 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 STARD10Q9Y365 291 aa14.81□□□□□ -0.04
HDDC3-206ENST00000561036 RBMX2Q9Y388 322 aaKnown RBP14.81□□□□□ -0.04
HDDC3-206ENST00000561036 GTF3C1Q12789 2109 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 LINC00854A0A1B0GVQ3 168 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 CENPXA8MT69 81 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 C1QTNF9BB2RNN3 333 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 SULT1C2O00338 296 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 LANCL1O43813 399 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 ECDO95905 644 aaPredicted RBP14.8□□□□□ -0.04
HDDC3-206ENST00000561036 CD3GP09693 182 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 C1QTNF9P0C862 333 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 GSTT2BP0CG30 244 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 VSIG8P0DPA2 414 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 CCL2P13500 99 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 SPNP16150 400 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 OPRM1P35372 400 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 WNT5AP41221 380 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 AP3S2P59780 193 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 SSBP1Q04837 148 aaKnown RBP14.8□□□□□ -0.04
HDDC3-206ENST00000561036 DYRK1AQ13627 763 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 BIVMQ86UB2 503 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 CDH24Q86UP0 819 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 FTMTQ8N4E7 242 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 UBASH3BQ8TF42 649 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 ZCCHC14Q8WYQ9 949 aaKnown RBP14.8□□□□□ -0.04
HDDC3-206ENST00000561036 FAM46BQ96A09 425 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 MS4A3Q96HJ5 214 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 C1orf147Q96MC9 270 aaPredicted RBP14.8□□□□□ -0.04
HDDC3-206ENST00000561036 NKX3-1Q99801 234 aaPredicted RBP14.8□□□□□ -0.04
HDDC3-206ENST00000561036 KCNK15Q9H427 330 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 CDH20Q9HBT6 801 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 SLC7A11Q9UPY5 501 aa14.8□□□□□ -0.04
HDDC3-206ENST00000561036 TRAV18A0A075B6X5 111 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 MSTNO14793 375 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 CST4P01036 141 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 IGKV3-15P01624 115 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 CHRM2P08172 466 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 TUBG1P23258 451 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 OR3A4PP47883 348 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 FUT6P51993 359 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 MTCP1P56278 107 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 KLRB1Q12918 225 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 UNC119Q13432 240 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 CRIP3Q6Q6R5 217 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 ZNF101Q8IZC7 436 aa14.79□□□□□ -0.04
HDDC3-206ENST00000561036 TOMM5Q8N4H5 51 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms