RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 ATP6V1E1P36543 226 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 ADARB1P78563 741 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF91Q05481 1191 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 CATSPERDQ86XM0 798 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF649Q9BS31 505 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 PATZ1Q9HBE1 687 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 C8orf4Q9NR00 106 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 MRPS18AQ9NVS2 196 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 NKX1-2Q9UD57 310 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 OR52A1Q9UKL2 312 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 SLC22A13Q9Y226 551 aa12.81□□□□□ -0.36
SNRPA1-213ENST00000560856 ISPDA4D126 451 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 PLPP2O43688 288 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 RPP14O95059 124 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 CLIC3O95833 236 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 KRT8P05787 483 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 DBTP11182 482 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 ATP6V1B1P15313 513 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 MDH2P40926 338 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 MAP2K3P46734 347 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 PRDX4Q13162 271 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 CR1LQ2VPA4 569 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 FAM76BQ5HYJ3 339 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF826PQ6ZT77 177 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 YIPF7Q8N8F6 280 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 HPSE2Q8WWQ2 592 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 OR5P3Q8WZ94 311 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 TMEM186Q96B77 213 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 TLNRD1Q9H1K6 362 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 DCLRE1BQ9H816 532 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 MOB1AQ9H8S9 216 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 FN3KRPQ9HA64 309 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 LPAR2Q9HBW0 351 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 AMBNQ9NP70 447 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 UBAP1Q9NZ09 502 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 MPC1Q9Y5U8 109 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 SNX5Q9Y5X3 404 aa12.8□□□□□ -0.36
SNRPA1-213ENST00000560856 MXRA5Q9NR99 2828 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 LRRC30A6NM36 301 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF850A8MQ14 1090 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 CEACAM18A8MTB9 384 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 TNFRSF13BO14836 293 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 LHBP01229 141 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 GRPP07492 148 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 WNT2P09544 360 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 CCL1P22362 96 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 ZFP36P26651 326 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 THBS2P35442 1172 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF154Q13106 437 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 SNCBQ16143 134 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 SMN1Q16637 294 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 CDONQ4KMG0 1287 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 TP53I3Q53FA7 332 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 FAM120AOSQ5T036 256 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF691Q5VV52 312 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF771Q7L3S4 317 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 C1orf87Q8N0U7 546 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 PRSS35Q8N3Z0 413 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 SPICQ8N5J4 248 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 ACBD7Q8N6N7 88 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF555Q8NEP9 628 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 OR1M1Q8NGA1 313 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 OR11L1Q8NGX0 322 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 OR8S1Q8NH09 359 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 OR51F2Q8NH61 342 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 PIGCQ92535 297 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 FAM71F1Q96KD3 344 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 Q96MT0 163 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 TMEM246Q9BRR3 403 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 HIF1ANQ9NWT6 349 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 RNF7Q9UBF6 113 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 MYRFQ9Y2G1 1151 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 V9GYS6 101 aa12.79□□□□□ -0.36
SNRPA1-213ENST00000560856 PPIAL4EA0A075B759 164 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 ZNF816-ZNF321PA0A0X1KG74 233 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 ERICH4A6NGS2 130 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 SNTNA6NMZ2 147 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 PPIAL4DF5H284 164 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 P2RY10O00398 339 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 DHRS3O75911 302 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 IGHA1P01876 353 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 PPIAL4FP0DN26 164 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 CFHR2P36980 270 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 GNALP38405 381 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 KIR3DL2P43630 455 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 OR12D2P58182 307 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 SEC61A1P61619 476 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 CSNK2BP67870 215 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 ACTC1P68032 377 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 ACTA1P68133 377 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 IL5RAQ01344 420 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 MZT1Q08AG7 82 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 RIPPLY1Q0D2K3 151 aa12.78□□□□□ -0.36
SNRPA1-213ENST00000560856 KRTAP21-3Q3LHN1 58 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms