RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 CNOT2Q9NZN8 540 aaKnown RBP13.12□□□□□ -0.31
LYSMD2-204ENST00000560491 FRRS1LQ9P0K9 344 aa13.12□□□□□ -0.31
LYSMD2-204ENST00000560491 RAB26Q9ULW5 256 aa13.12□□□□□ -0.31
LYSMD2-204ENST00000560491 ZNF850A8MQ14 1090 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 PPIHO43447 177 aaKnown RBP13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 GMDSO60547 372 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 DHRS3O75911 302 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 FAHP16930 419 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 TNFRSF1AP19438 455 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 CD200P41217 278 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 MAP2K3P46734 347 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 PRDX4Q13162 271 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 HFEQ30201 348 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 AVPI1Q5T686 147 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 FDX2Q6P4F2 183 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 MOGAT3Q86VF5 341 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 RDH10Q8IZV5 341 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 PLPP7Q8NBV4 271 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 ZNF540Q8NDQ6 660 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 SEMA6DQ8NFY4 1073 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 PIGCQ92535 297 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 SGCDQ92629 289 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 MYCBPQ99417 103 aaPredicted RBP13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 ZNF184Q99676 751 aaPredicted RBP13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 GCM1Q9NP62 436 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 PIGLQ9Y2B2 252 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 EXOSC1Q9Y3B2 195 aaKnown RBP13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 MED13LQ71F56 2210 aa13.11□□□□□ -0.31
LYSMD2-204ENST00000560491 IGHV4-61A0A0C4DH41 118 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 ZNF816-ZNF321PA0A0X1KG74 233 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 A0A1B0GVI7 797 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 LOC107986453A0A1B0GWG9 222 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 A6NIN4 97 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 SYT7O43581 403 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 LMX1BO60663 402 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 CST4P01036 141 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 CCL1P22362 96 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 C21orf33P30042 268 aaPredicted RBP13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 GNALP38405 381 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 GPR6P46095 362 aaPredicted RBP13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 GTF2A1P52655 376 aaPredicted RBP13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 ALKBH1Q13686 389 aaKnown RBP13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 SNCBQ16143 134 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 DMRTC1Q5HYR2 192 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 XAF1Q6GPH4 301 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 DOK3Q7L591 496 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 WDR86Q86TI4 376 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 STX19Q8N4C7 294 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 FTMTQ8N4E7 242 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 KLHL36Q8N4N3 616 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 OR14K1Q8NGZ2 314 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 OR8S1Q8NH09 359 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 FGF23Q9GZV9 251 aaPredicted RBP13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 NARFLQ9H6Q4 476 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 TMEM106BQ9NUM4 274 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 PAK1IP1Q9NWT1 392 aaPredicted RBP13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 PPP1R3CQ9UQK1 317 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 CAB39Q9Y376 341 aaPredicted RBP13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 NOP16Q9Y3C1 178 aaKnown RBP13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 V9GYS6 101 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 F8P00451 2351 aa13.1□□□□□ -0.31
LYSMD2-204ENST00000560491 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 OR4C45A6NMZ5 311 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 CLDN25C9JDP6 229 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 PTGES3LE9PB15 166 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 WNT9BO14905 357 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 MTRF1O75570 445 aaKnown RBP13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 UBCP0CG48 685 aaKnown RBP13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 ATP6V1B1P15313 513 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 PMELP40967 661 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 GBX2P52951 348 aaPredicted RBP13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 RIPPLY1Q0D2K3 151 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 MPPED2Q15777 294 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 CEP78Q5JTW2 689 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 TMPRSS11AQ6ZMR5 421 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 KLBQ86Z14 1044 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 ZDHHC23Q8IYP9 409 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 OR10AC1Q8NH08 325 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 HPSE2Q8WWQ2 592 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 GATAD2BQ8WXI9 593 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 ITPKCQ96DU7 683 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 SMR3AQ99954 134 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 UFSP2Q9NUQ7 469 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 CHCHD3Q9NX63 227 aaKnown RBP13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 ENPP5Q9UJA9 477 aa13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 YLPM1P49750 1951 aaKnown RBP13.09□□□□□ -0.31
LYSMD2-204ENST00000560491 ACANP16112 2415 aa13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 LRP5LA4QPB2 252 aa13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 ANXA2P2A6NMY6 339 aa13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 CYB5R3P00387 301 aaPredicted RBP13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 LALBAP00709 142 aa13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 CDK1P06493 297 aa13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 GRPP07492 148 aa13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 INHBBP09529 407 aa13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 USF1P22415 310 aaPredicted RBP13.08□□□□□ -0.32
LYSMD2-204ENST00000560491 THBS2P35442 1172 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms