RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 HIST2H3PS2Q5TEC6 136 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 C22orf42Q6IC83 251 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 CORO6Q6QEF8 472 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 HIST2H3AQ71DI3 136 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF627Q7L945 461 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 GLCCI1Q86VQ1 547 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 TPRA1Q86W33 373 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 SLC22A24Q8N4F4 322 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF676Q8N7Q3 588 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 NEU4Q8WWR8 484 aaPredicted RBP17.54■□□□□ 0.4
PSEN1-225ENST00000560005 MAP6Q96JE9 813 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 ALKBH3Q96Q83 286 aaPredicted RBP17.54■□□□□ 0.4
PSEN1-225ENST00000560005 TIMM10BQ9Y5J6 103 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 B4DSR2 109 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF879B4DU55 563 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 ERCC1P07992 297 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-225ENST00000560005 PSKH1P11801 424 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 RORCP51449 518 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 RIN1Q13671 783 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 CEACAM19Q7Z692 300 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 PEG10Q86TG7 708 aaKnown RBP17.53■□□□□ 0.4
PSEN1-225ENST00000560005 C4orf45Q96LM5 186 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 MMP27Q9H306 513 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 SP140LQ9H930 580 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 DDX28Q9NUL7 540 aaKnown RBP17.53■□□□□ 0.4
PSEN1-225ENST00000560005 FRRS1LQ9P0K9 344 aa17.53■□□□□ 0.4
PSEN1-225ENST00000560005 TMEM269A0A1B0GVZ9 245 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 OR4C45A6NMZ5 311 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 LOC110117498-PIK3R3F6TDL0 507 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 LYNX1G3V0Z9 82 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 SC5DO75845 299 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 CLPXO76031 633 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 ZFPL1O95159 310 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 LYNX1P0DP58 116 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 MYL9P24844 172 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 MTNR1BP49286 362 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 NANOS3P60323 173 aaKnown RBP17.52■□□□□ 0.4
PSEN1-225ENST00000560005 SCGB2A2Q13296 93 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 PDLIM3Q53GG5 364 aaPredicted RBP17.52■□□□□ 0.4
PSEN1-225ENST00000560005 ELFN2Q5R3F8 820 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 TMEM244Q5VVB8 128 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 UNQ9370/PRO34162Q6UXP9 181 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF813Q6ZN06 617 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 TMEM91Q6ZNR0 172 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 SLC16A14Q7RTX9 510 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 CATSPERDQ86XM0 798 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 CROCCP3Q8IVE0 287 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 LRRC18Q8N456 261 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 GPR148Q8TDV2 347 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 UBASH3BQ8TF42 649 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 HDHD2Q9H0R4 259 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 OBP2BQ9NPH6 170 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 PCDHB10Q9UN67 800 aa17.52■□□□□ 0.4
PSEN1-225ENST00000560005 TRIM77I1YAP6 450 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 CALCRP30988 508 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 HILS1P60008 231 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 ARF1P84077 181 aaKnown RBP17.51■□□□□ 0.39
PSEN1-225ENST00000560005 NAAAQ02083 359 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 TBRG1Q3YBR2 411 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 SLC36A2Q495M3 483 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 Q499Y3 187 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 ZMAT1Q5H9K5 638 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 PRR31Q5SQ13 230 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 ANKRD16Q6P6B7 361 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 CFAP77Q6ZQR2 320 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 SPATC1Q76KD6 591 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 CCDC36Q8IYA8 594 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 SPTSSAQ969W0 71 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 RNF166Q96A37 237 aaPredicted RBP17.51■□□□□ 0.39
PSEN1-225ENST00000560005 KCNJ15Q99712 375 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 PDCD1LG2Q9BQ51 273 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 LPAR2Q9HBW0 351 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 HIF1ANQ9NWT6 349 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 FBXO9Q9UK97 447 aaPredicted RBP17.51■□□□□ 0.39
PSEN1-225ENST00000560005 SPEF1Q9Y4P9 236 aa17.51■□□□□ 0.39
PSEN1-225ENST00000560005 TRAV1-2A0A0B4J238 106 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 RER1O15258 196 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 SGCEO43556 437 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 CDRT1O95170 752 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 ISG15P05161 165 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 CECR9P0C854 216 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 UBCP0CG48 685 aaKnown RBP17.5■□□□□ 0.39
PSEN1-225ENST00000560005 CFL1P23528 166 aaKnown RBP17.5■□□□□ 0.39
PSEN1-225ENST00000560005 PSMA6P60900 246 aaKnown RBP17.5■□□□□ 0.39
PSEN1-225ENST00000560005 ZNF404Q494X3 552 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 BCL2L15Q5TBC7 163 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 OTPQ5XKR4 325 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 LINGO2Q7L985 606 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 TMEM186Q96B77 213 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 ZNF837Q96EG3 531 aaPredicted RBP17.5■□□□□ 0.39
PSEN1-225ENST00000560005 BOD1Q96IK1 185 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 ATF6BQ99941 703 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 SLITRK2Q9H156 845 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 DYNLRB1Q9NP97 96 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 CRNNQ9UBG3 495 aaPredicted RBP17.5■□□□□ 0.39
PSEN1-225ENST00000560005 ATPIF1Q9UII2 106 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 OR52A1Q9UKL2 312 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 GTF2A1LQ9UNN4 478 aa17.5■□□□□ 0.39
PSEN1-225ENST00000560005 TMEM127O75204 238 aa17.49■□□□□ 0.39
PSEN1-225ENST00000560005 SRSF10O75494 262 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms