RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CADM3Q8N126 398 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 COL25A1Q9BXS0 654 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 CLEC2DQ9UHP7 191 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 SLC5A6Q9Y289 635 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 FER1L4A9Z1Z3 1794 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 ALOX12BO75342 701 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 PGA3P0DJD8 388 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 Q6ZPB1 254 aaPredicted RBP12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 MARCH1Q8TCQ1 289 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 CHST2Q9Y4C5 530 aa12.57□□□□□ -0.4
CSPG4P12-202ENST00000559989 IGSF23A1L1A6 192 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 PERPQ96FX8 193 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 SLC25A33Q9BSK2 321 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 CDRT15L2A8MXV6 281 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 CD81P60033 236 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 GABRA6Q16445 453 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 NPWQ8N729 165 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF511Q8NB15 262 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 PACRGQ96M98 296 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 GPA33Q99795 319 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 LTN1O94822 1766 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 MFSD2BA6NFX1 497 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 GLI4P10075 376 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 FAM78BQ5VT40 261 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 GPRIN1Q7Z2K8 1008 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 NPEPL1Q8NDH3 523 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 MCHR2Q969V1 340 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 SPATA31D1Q6ZQQ2 1576 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 M0R135 149 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 ALDOCP09972 364 aaKnown RBP12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 OPRM1P35372 400 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF480Q8WV37 535 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 EDAQ92838 391 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 STARD4Q96DR4 205 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF799Q96GE5 643 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 LPAR5Q9H1C0 372 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMEM30CPA0ZSE6 113 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 SYNGR2O43760 224 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 CD68P34810 354 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 PRDX4Q13162 271 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 FNDC7Q5VTL7 733 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMEM81Q6P7N7 255 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 C10orf126Q8N4M7 172 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 PRDM7Q9NQW5 492 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 PPP1CCP36873 323 aaKnown RBP12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 DGCR2P98153 550 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 C12orf76Q8N812 135 aaPredicted RBP12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 BEND2Q8NDZ0 799 aa12.56□□□□□ -0.4
CSPG4P12-202ENST00000559989 IFITM10A6NMD0 228 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 ACAA1P09110 424 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 PSMB5P28074 263 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 CTBSQ01459 385 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 GDE1Q9NZC3 331 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 R4GMQ9 66 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 ARHGEF28Q8N1W1 1705 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 ISLRO14498 428 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 MBTPS2O43462 519 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 FAM71E1Q6IPT2 247 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 CHRNA10Q9GZZ6 450 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 ACTL6AO96019 429 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 SLC35E2P0CK97 266 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 ERVS71-1P61550 626 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 CLN3Q13286 438 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR1B1Q8NGR6 318 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 RDH5Q92781 318 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 GPR84Q9NQS5 396 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR51B4Q9Y5P0 310 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 TEAD1P28347 426 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 PCBP3P57721 371 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 PNRC1Q12796 327 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMEM128Q5BJH2 165 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 KTI12Q96EK9 354 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 ANGPTL4Q9BY76 406 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 S1PR5Q9H228 398 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMEM167BQ9NRX6 74 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 LOC107984156A0A0G2JMH3 177 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 ARL17AQ8IVW1 177 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 SCMH1Q96GD3 660 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 PDLIM5Q96HC4 596 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 RAB40CQ96S21 281 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 NAT8Q9UHE5 227 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 H7C2G1 150 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 NDUFB3O43676 98 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 VAMP5O95183 116 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 CRYAAP02489 173 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 CD96P40200 585 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 BCL7CQ8WUZ0 217 aaPredicted RBP12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR2D2Q9H210 308 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 WSB1Q9Y6I7 421 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 IGHV3-9P01782 118 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 SLC10A3P09131 477 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 CLEC2LP0C7M8 214 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 RPS4Y1P22090 263 aaKnown RBP12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 XKR7Q5GH72 579 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 DEFB108BQ8NET1 73 aa12.55□□□□□ -0.4
CSPG4P12-202ENST00000559989 GAGE10A6NGK3 116 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 CBR3O75828 277 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 IL2RAP01589 272 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 HAAOP46952 286 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms