RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 FAM86B1Q8N7N1 296 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 BEND2Q8NDZ0 799 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 PROKR2Q8NFJ6 384 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 OR5T2Q8NGG2 359 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 MRAPQ8TCY5 172 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 ZNRF4Q8WWF5 429 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 CFHR4Q92496 578 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 SPSB4Q96A44 273 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 C12orf43Q96C57 262 aaKnown RBP13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 KCNJ15Q99712 375 aa13.28□□□□□ -0.28
CDC42BPB-205ENST00000559245 TIPRLO75663 272 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 GADD45GO95257 159 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 SELLP14151 372 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 FAM3AP98173 230 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 ACSM1Q08AH1 577 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 LY6EQ16553 131 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 ATPAF1Q5TC12 328 aaPredicted RBP13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 STUMQ69YW2 141 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 SLC16A9Q7RTY1 509 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 KLHDC1Q8N7A1 406 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 CYB561A3Q8NBI2 242 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR51L1Q8NGJ5 315 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR4C13Q8NGP0 309 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 PPP1R14AQ96A00 147 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 SLAMF6Q96DU3 332 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 SSX3Q99909 188 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 TOR3AQ9H497 397 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 CENPMQ9NSP4 180 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 DCAF13Q9NV06 445 aaKnown RBP13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 SAMD4AQ9UPU9 718 aaKnown RBP13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 COMMD3-BMI1R4GMX3 469 aa13.27□□□□□ -0.29
CDC42BPB-205ENST00000559245 NDUFAB1O14561 156 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 CDIPTO14735 213 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 TBX1O43435 398 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 GSSP48637 474 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 SMIM11AP58511 58 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 GMFBP60983 142 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 SPIBQ01892 262 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 TIGD6Q17RP2 521 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 NCR3LG1Q68D85 454 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 GLYATQ6IB77 296 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR9Q1Q8NGQ5 310 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR2T4Q8NH00 348 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR2T6Q8NHC8 308 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 DDOQ99489 341 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 DNTTIP1Q9H147 329 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 PPP1R3EQ9H7J1 279 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 METTL8Q9H825 291 aaKnown RBP13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 EFCAB1Q9HAE3 211 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 HAO2Q9NYQ3 351 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 MAB21L2Q9Y586 359 aa13.26□□□□□ -0.29
CDC42BPB-205ENST00000559245 ZNF878C9JN71 531 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 M0R1W7 72 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 SPARCP09486 303 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 ENTPD1P49961 510 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 LOXL3P58215 753 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 OXLD1Q5BKU9 147 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 PGBD2Q6P3X8 592 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 C17orf50Q8WW18 174 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 RORBQ92753 470 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 SGK3Q96BR1 496 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 REEP6Q96HR9 211 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 FAM234AQ9H0X4 552 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 TLNRD1Q9H1K6 362 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 WDR13Q9H1Z4 485 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 RANBP3Q9H6Z4 567 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 SNTG1Q9NSN8 517 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 ABCD2Q9UBJ2 740 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 SLC25A10Q9UBX3 287 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 ZNF391Q9UJN7 358 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 V9GYQ6 96 aa13.25□□□□□ -0.29
CDC42BPB-205ENST00000559245 A0A1W2PQ09 198 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 NKX6-3A6NJ46 265 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 TFF1P04155 84 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 ANXA2P07355 339 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 NDUFB7P17568 137 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 GNALP38405 381 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 IFNGR2P38484 337 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 CX3CR1P49238 355 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 NUDT2P50583 147 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 TSPAN31Q12999 210 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 DGUOKQ16854 277 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 HACD2Q6Y1H2 254 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 ZNF788Q6ZQV5 615 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 LYG1Q8N1E2 194 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR51G2Q8NGK0 314 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 GNPDA2Q8TDQ7 276 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 ITPKCQ96DU7 683 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 MED30Q96HR3 178 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 CLPTM1LQ96KA5 538 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 GAFA1Q96PS6 74 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 RAB3IPQ96QF0 476 aaPredicted RBP13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 PAPOLGQ9BWT3 736 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 EGLN3Q9H6Z9 239 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 SF3B6Q9Y3B4 125 aaKnown RBP13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 RHBDD3Q9Y3P4 386 aa13.24□□□□□ -0.29
CDC42BPB-205ENST00000559245 KMT2CQ8NEZ4 4911 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 hCG_38984A0A1B0GV85 526 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 ZNF593O00488 134 aaPredicted RBP13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 XPNPEP2O43895 674 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms