RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 C5orf63A6NC05 138 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 IQCF6A8MYZ5 107 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 PPIAL4DF5H284 164 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 ARPC3O15145 178 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 SPRY1O43609 319 aaPredicted RBP6.11□□□□□ -1.43
SPG11-213ENST00000558988 CCNB2O95067 398 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 GRPP07492 148 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 PPIAL4FP0DN26 164 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 IGHV4-38-2P0DP08 117 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 PSKH1P11801 424 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 HSD17B1P14061 328 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 OMGP23515 440 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 PMELP40967 661 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 GSSP48637 474 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 ELLP55199 621 aaPredicted RBP6.11□□□□□ -1.43
SPG11-213ENST00000558988 CD83Q01151 205 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 TSPAN31Q12999 210 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 ECH1Q13011 328 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 MPPED2Q15777 294 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 RSPO1Q2MKA7 263 aaPredicted RBP6.11□□□□□ -1.43
SPG11-213ENST00000558988 GFOD2Q3B7J2 385 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 SNAI3Q3KNW1 292 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 C4orf46Q504U0 113 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 AWAT1Q58HT5 328 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 KLF17Q5JT82 389 aaPredicted RBP6.11□□□□□ -1.43
SPG11-213ENST00000558988 LYPD2Q6UXB3 125 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 BRD3OSQ6XYD6 125 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 USP43Q70EL4 1123 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 DCXRQ7Z4W1 244 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 C1orf87Q8N0U7 546 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 PARP8Q8N3A8 854 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 AQP11Q8NBQ7 271 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 OR2T4Q8NH00 348 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 SPTSSAQ969W0 71 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 PLEKHA8Q96JA3 519 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 SLC30A2Q9BRI3 323 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 BTBD10Q9BSF8 475 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 ADAT1Q9BUB4 502 aaKnown RBP6.11□□□□□ -1.43
SPG11-213ENST00000558988 NTN4Q9HB63 628 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 TMEM165Q9HC07 324 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 ARMC1Q9NVT9 282 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 DNAJC27Q9NZQ0 273 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 CLN8Q9UBY8 286 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 ATPIF1Q9UII2 106 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 LRCH1Q9Y2L9 728 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 ARL2BPQ9Y2Y0 163 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 CDH10Q9Y6N8 788 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 IGHV3OR15-7A0A075B7D8 119 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 IGHV2-70DA0A0C4DH43 119 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 CD300LBA8K4G0 201 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 F5H0A9 414 aaPredicted RBP6.1□□□□□ -1.43
SPG11-213ENST00000558988 DCTN3O75935 186 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 MPIG6BO95866 241 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 GASTP01350 101 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 ANXA2P07355 339 aaKnown RBP6.1□□□□□ -1.43
SPG11-213ENST00000558988 WNT2P09544 360 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 CLUP10909 449 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 ANOS1P23352 680 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 GMFBP60983 142 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 FGF12P61328 243 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 HIST1H3AP68431 136 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 ZNF92Q03936 586 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 MAB21L1Q13394 359 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 CRMP1Q14194 572 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 GLYATL3Q5SZD4 288 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 HIST2H3PS2Q5TEC6 136 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 RUSC1-AS1Q66K80 236 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 TMEM200BQ69YZ2 307 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 ZNF826PQ6ZT77 177 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 HIST2H3AQ71DI3 136 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 IQCF1Q8N6M8 205 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 SLC37A3Q8NCC5 494 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 OR56B2PQ8NGI1 322 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 OR8D4Q8NGM9 314 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 OR10S1Q8NGN2 331 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 ZNRF4Q8WWF5 429 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 CCDC124Q96CT7 223 aaKnown RBP6.1□□□□□ -1.43
SPG11-213ENST00000558988 ZNF48Q96MX3 618 aaPredicted RBP6.1□□□□□ -1.43
SPG11-213ENST00000558988 NUDT16L1Q9BRJ7 211 aaKnown RBP6.1□□□□□ -1.43
SPG11-213ENST00000558988 PCGF1Q9BSM1 259 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 TSSK6Q9BXA6 273 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 REEP1Q9H902 201 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 MED20Q9H944 212 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 FN3KRPQ9HA64 309 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 IL1RAPQ9NPH3 570 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 PNRC2Q9NPJ4 139 aaKnown RBP6.1□□□□□ -1.43
SPG11-213ENST00000558988 C1orf123Q9NWV4 160 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 NDE1Q9NXR1 346 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 VNN3Q9NY84 501 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 MIOXQ9UGB7 285 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 CD300AQ9UGN4 299 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 CYB5R1Q9UHQ9 305 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 SAMHD1Q9Y3Z3 626 aaKnown RBP6.1□□□□□ -1.43
SPG11-213ENST00000558988 LYVE1Q9Y5Y7 322 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 COMMD3-BMI1R4GMX3 469 aa6.1□□□□□ -1.43
SPG11-213ENST00000558988 PPIAL4CA0A0B4J2A2 164 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 FAM183AA6NL82 134 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 RIIAD1A6NNX1 92 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 A8MXK9 166 aa6.09□□□□□ -1.43
SPG11-213ENST00000558988 H3BN98 237 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms