RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 AHSPQ9NZD4 102 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 PCNX2A6NKB5 2137 aa1.49□□□□□ -2.17
VPS13C-207ENST00000558919 IGHV1-69DA0A0B4J2H0 117 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 NDUFC2-KCTD14E9PQ53 114 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 TNFRSF11BO00300 401 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 GABRPO00591 440 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 ZBTB5O15062 677 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 XRCC2O43543 280 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 OXTP01178 125 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 PGA4P0DJD7 388 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 PGA3P0DJD8 388 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 PGA5P0DJD9 388 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 RAB5AP20339 215 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 CD82P27701 267 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 HTR1DP28221 377 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 UBE2E1P51965 193 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 RPS15AP62244 130 aaKnown RBP1.48□□□□□ -2.17
VPS13C-207ENST00000558919 RAB11AP62491 216 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 DNAJC3Q13217 504 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 TMED1Q13445 227 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 DGCR6Q14129 220 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 ZNF266Q14584 549 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 RAB11BQ15907 218 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 RPEL1Q2QD12 228 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 KLHL40Q2TBA0 621 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 GCSAMLQ5JQS6 135 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 RWDD4Q6NW29 188 aaKnown RBP1.48□□□□□ -2.17
VPS13C-207ENST00000558919 FAM122BQ7Z309 247 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 VKORC1L1Q8N0U8 176 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 LRRC75AQ8NAA5 344 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 INO80EQ8NBZ0 244 aaPredicted RBP1.48□□□□□ -2.17
VPS13C-207ENST00000558919 OR10W1Q8NGF6 305 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 OR52K1Q8NGK4 314 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 OR51F2Q8NH61 342 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 ITFG1Q8TB96 612 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 ZNF75CPQ92670 426 aaPredicted RBP1.48□□□□□ -2.17
VPS13C-207ENST00000558919 NAT6Q93015 286 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 ISG20Q96AZ6 181 aaKnown RBP1.48□□□□□ -2.17
VPS13C-207ENST00000558919 ZFP3Q96NJ6 502 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 TOLLIPQ9H0E2 274 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 DEFB129Q9H1M3 183 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 CD209Q9NNX6 404 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 ZC4H2Q9NQZ6 224 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 PXMP2Q9NR77 195 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 CHRAC1Q9NRG0 131 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 SLC17A7Q9P2U7 560 aa1.48□□□□□ -2.17
VPS13C-207ENST00000558919 PEF1Q9UBV8 284 aaKnown RBP1.48□□□□□ -2.17
VPS13C-207ENST00000558919 YARS2Q9Y2Z4 477 aaKnown RBP1.48□□□□□ -2.17
VPS13C-207ENST00000558919 CHTOPQ9Y3Y2 248 aaKnown RBP1.48□□□□□ -2.17
VPS13C-207ENST00000558919 PCDH11XQ9BZA7 1347 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 CEACAM18A8MTB9 384 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 ZNF878C9JN71 531 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 ANKRD65E5RJM6 399 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 MFNGO00587 321 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 PLPP1O14494 284 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 TAAR5O14804 337 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 AKR7A2O43488 359 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 NMT2O60551 498 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 RAD1O60671 282 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 KRT16P08779 473 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 GFAPP14136 432 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 NTF3P20783 257 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 MYL9P24844 172 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 TALDO1P37837 337 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 PPICP45877 212 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 DAOAP59103 153 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 KDSRQ06136 332 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 ZNF33AQ06730 810 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 PNOCQ13519 176 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 DOC2AQ14183 400 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 TFDP2Q14188 446 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 RBMY1FQ15415 496 aaKnown RBP1.47□□□□□ -2.17
VPS13C-207ENST00000558919 PRSS54Q6PEW0 395 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 ADM2Q7Z4H4 148 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 CMTM8Q8IZV2 173 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 ZNF321PQ8N8H1 164 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 UBAC2Q8NBM4 344 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 OR5AR1Q8NGP9 310 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 OR1J4Q8NGS1 313 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 RAB1CQ92928 201 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 HAUS1Q96CS2 278 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 SGTBQ96EQ0 304 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 CSPG4P5Q96PW8 444 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 BCL7BQ9BQE9 202 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 SLIRPQ9GZT3 109 aaKnown RBP1.47□□□□□ -2.17
VPS13C-207ENST00000558919 C8orf33Q9H7E9 229 aaPredicted RBP1.47□□□□□ -2.17
VPS13C-207ENST00000558919 RGS18Q9NS28 235 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 MCUBQ9NWR8 336 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 KIAA1671Q9BY89 1806 aa1.47□□□□□ -2.17
VPS13C-207ENST00000558919 ADGRA3Q8IWK6 1321 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 BOLA2-SMG1P6H3BVE0 249 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 TRDMT1O14717 391 aaKnown RBP1.46□□□□□ -2.18
VPS13C-207ENST00000558919 SIVA1O15304 175 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 SLC16A7O60669 478 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 HSBP1O75506 76 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 FARS2O95363 451 aaKnown RBP1.46□□□□□ -2.18
VPS13C-207ENST00000558919 TDP2O95551 362 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 MYCNOSP40205 109 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 GPR1P46091 355 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 OR1G1P47890 313 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms