RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 FOSL2P15408 326 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 ABHD17BQ5VST6 288 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 ESX1Q8N693 406 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 ADAD2Q8NCV1 583 aaKnown RBP13.74□□□□□ -0.21
AP4E1-202ENST00000558439 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 SLAMF9Q96A28 289 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 PLSCR5A0PG75 271 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 PRR19A6NJB7 356 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 BCL2L11O43521 198 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 SMUG1Q53HV7 270 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 TMEM128Q5BJH2 165 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 FBXW12Q6X9E4 464 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 TMEM200AQ86VY9 491 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF695Q8IW36 515 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 IL22RA1Q8N6P7 574 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 KCNS2Q9ULS6 477 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 RALGAPA1Q6GYQ0 2036 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 H3BMH7 237 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 MRPL33O75394 65 aaKnown RBP13.73□□□□□ -0.21
AP4E1-202ENST00000558439 TTRP02766 147 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 IGKV3-11P04433 115 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 NMBP08949 121 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF728P0DKX0 622 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 MST1P26927 711 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 PIGMQ9H3S5 423 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 PCDHB10Q9UN67 800 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 LAMA3Q16787 3333 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 SSX5O60225 188 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 HIST1H1DP16402 221 aaKnown RBP13.73□□□□□ -0.21
AP4E1-202ENST00000558439 EFNA3P52797 238 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 C6orf201Q7Z4U5 140 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 SLC25A45Q8N413 288 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 SGCZQ96LD1 299 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 NKX6-2Q9C056 277 aaPredicted RBP13.73□□□□□ -0.21
AP4E1-202ENST00000558439 MOB1AQ9H8S9 216 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 CALHM2Q9HA72 323 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 ABHD16AO95870 558 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 CNR1P21554 472 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 SUMO3P55854 103 aaPredicted RBP13.73□□□□□ -0.21
AP4E1-202ENST00000558439 HLA-BQ31612 363 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 FAM122CQ6P4D5 195 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 TMEM104Q8NE00 496 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF501Q96CX3 271 aaPredicted RBP13.73□□□□□ -0.21
AP4E1-202ENST00000558439 RASL10BQ96S79 203 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 PIGQQ9BRB3 760 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 TRAF4Q9BUZ4 470 aaPredicted RBP13.73□□□□□ -0.21
AP4E1-202ENST00000558439 VSIG4Q9Y279 399 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 MTCH2Q9Y6C9 303 aa13.73□□□□□ -0.21
AP4E1-202ENST00000558439 IGHV3-64DA0A0J9YX35 117 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 PHF1O43189 567 aaPredicted RBP13.72□□□□□ -0.21
AP4E1-202ENST00000558439 ZP3P21754 424 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 CLINT1Q14677 625 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 COL13A1Q5TAT6 717 aaPredicted RBP13.72□□□□□ -0.21
AP4E1-202ENST00000558439 P4HA3Q7Z4N8 544 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 PLPP5Q8NEB5 264 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 RNF133Q8WVZ7 376 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 SULT4A1Q9BR01 284 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 NPDC1Q9NQX5 325 aaPredicted RBP13.72□□□□□ -0.21
AP4E1-202ENST00000558439 MS4A18H0YCH9 400 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 IFNA2P01563 188 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF14P17017 642 aaPredicted RBP13.72□□□□□ -0.21
AP4E1-202ENST00000558439 MS4A18Q3C1V0 323 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 LINC00696Q6ZRV3 163 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 TAF9BQ9HBM6 251 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 OCIAD1Q9NX40 245 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 GPR160Q9UJ42 338 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 GSTP1P09211 210 aaKnown RBP13.72□□□□□ -0.21
AP4E1-202ENST00000558439 RPS18P62269 152 aaKnown RBP13.72□□□□□ -0.21
AP4E1-202ENST00000558439 RBM39Q14498 530 aaKnown RBP13.72□□□□□ -0.21
AP4E1-202ENST00000558439 DTWD2Q8NBA8 298 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 OR1S2Q8NGQ3 325 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 A0A096LPE4 126 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 IGKV1D-43A0A0B4J1Z2 117 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 A0A1W2PPZ6 126 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 XRCC2O43543 280 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 OR5H8P0DN80 308 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 SPINK2P20155 84 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 IL32P24001 234 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 CD80P33681 288 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 MMP16P51512 607 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 LRRC75AQ8NAA5 344 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 OR5M9Q8NGP3 310 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 LIPHQ8WWY8 451 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 DUSP15Q9H1R2 295 aaPredicted RBP13.72□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF286AQ9HBT8 521 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 PADI1Q9ULC6 663 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 KCNK7Q9Y2U2 307 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 HDGFL3Q9Y3E1 203 aa13.72□□□□□ -0.21
AP4E1-202ENST00000558439 PHF3Q92576 2039 aaKnown RBP13.71□□□□□ -0.21
AP4E1-202ENST00000558439 SNAPINO95295 136 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 CELA2AP08217 269 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 PTGFRP43088 359 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 HNF4GQ14541 408 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 RSPO4Q2I0M5 234 aaPredicted RBP13.71□□□□□ -0.21
AP4E1-202ENST00000558439 BPIFCQ8NFQ6 507 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 NPAS1Q99742 590 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 UQCC2Q9BRT2 126 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 B4GALT7Q9UBV7 327 aa13.71□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF629Q9UEG4 869 aaPredicted RBP13.71□□□□□ -0.21
AP4E1-202ENST00000558439 TUBAL3A6NHL2 446 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms