RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TNFRSF1BP20333 461 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 HOXD3P31249 432 aaPredicted RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 VDAC2P45880 294 aaPredicted RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 RPS6KA3P51812 740 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 CAV3P56539 151 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 MTPNP58546 118 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 TRAP1Q12931 704 aaKnown RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 KRR1Q13601 381 aaKnown RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 FHL1Q13642 323 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 CYLC2Q14093 348 aaPredicted RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 SELPLGQ14242 412 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 HABP2Q14520 560 aaPredicted RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 MEP1BQ16820 701 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 PCK2Q16822 640 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 HCP5Q6MZN7 132 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 SLC18B1Q6NT16 456 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 DUX4L9Q6RFH8 374 aaPredicted RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 ZNF730Q6ZMV8 503 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 TMPRSS11FQ6ZWK6 438 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 FAM122BQ7Z309 247 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 DHDDSQ86SQ9 333 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 ADCK1Q86TW2 530 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 DPP10Q8N608 796 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 FAM216BQ8N7L0 139 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 SDR9C7Q8NEX9 313 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 OR5T2Q8NGG2 359 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 OR13C2Q8NGS9 318 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 PIFOQ8TCI5 191 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 RPS4Y2Q8TD47 263 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 WIPF2Q8TF74 440 aaPredicted RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 TSPEARQ8WU66 669 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 ZNF799Q96GE5 643 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 PRRC1Q96M27 445 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 OR5M11Q96RB7 305 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 ATF6BQ99941 703 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 MCRIP2Q9BUT9 160 aaKnown RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 SSBP4Q9BWG4 385 aaPredicted RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 SRA1Q9HD15 236 aaKnown RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 HAO2Q9NYQ3 351 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 NKIRAS1Q9NYS0 192 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.19□□□□□ -1.74
SPG11-208ENST00000558155 DUX4Q9UBX2 424 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 ZNF391Q9UJN7 358 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 A4GNTQ9UNA3 340 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 B9D1Q9UPM9 204 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 IER3IP1Q9Y5U9 82 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 LHFPL6Q9Y693 200 aa4.19□□□□□ -1.74
SPG11-208ENST00000558155 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
SPG11-208ENST00000558155 TMEM120BA0PK00 339 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 A6NDX4 124 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 TRIM64CA6NLI5 447 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SOCS2O14508 198 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 CDIPTO14735 213 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SYNGR1O43759 233 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 RAMP3O60896 148 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 PTP4A3O75365 173 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 RHBDL1O75783 438 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 RENP00797 406 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 HLA-DQA2P01906 255 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 ACAA1P09110 424 aaPredicted RBP4.18□□□□□ -1.74
SPG11-208ENST00000558155 ZNF823P16415 610 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 AMY2BP19961 511 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 CDKN2AP42771 156 aaKnown RBP4.18□□□□□ -1.74
SPG11-208ENST00000558155 GPR4P46093 362 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 GABRA2P47869 451 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 IDH3AP50213 366 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 GZMMP51124 257 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 RAB13P51153 203 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SLC7A2P52569 658 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 CRYBA2P53672 197 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SLC18A1P54219 525 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 VSNL1P62760 191 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 BLCAPP62952 87 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SELENOWP63302 87 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 ELF3P78545 371 aaPredicted RBP4.18□□□□□ -1.74
SPG11-208ENST00000558155 DGCR2P98153 550 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SPIBQ01892 262 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 NFYCQ13952 458 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 TAF13Q15543 124 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 SNCBQ16143 134 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 RFX4Q33E94 735 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 CYBRD1Q53TN4 286 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 TNFAIP8L3Q5GJ75 292 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 DMRTC1Q5HYR2 192 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 CASC10Q5T4H9 136 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 ERICH5Q6P6B1 374 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 DRAM2Q6UX65 266 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 WDR82Q6UXN9 313 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 DPY19L2P2Q6ZN68 376 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 ZNF788Q6ZQV5 615 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 CCDC121Q6ZUS5 278 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 MBOAT2Q6ZWT7 520 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 LINC00346Q8IVM7 164 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 MKXQ8IYA7 352 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 FAM185AQ8N0U4 392 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 LNX2Q8N448 690 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 CYB561A3Q8NBI2 242 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 OR1M1Q8NGA1 313 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 OR56B2PQ8NGI1 322 aa4.18□□□□□ -1.74
SPG11-208ENST00000558155 OR4C15Q8NGM1 316 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms