RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PCSK5Q92824 1860 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 CACNA1FO60840 1977 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 ZNF233A6NK53 670 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 IFITM10A6NMD0 228 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 LINC01619G3V211 115 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 MYL12BO14950 172 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 TRAPPC3O43617 180 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 SULT1B1O43704 296 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 MPZL2O60487 215 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 HPGDSO60760 199 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 ZNF354AO60765 605 aaPredicted RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 ZG16O60844 167 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 GLSO94925 669 aaPredicted RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 HLA-AP01891 365 aaKnown RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 BGLAPP02818 100 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 MMP7P09237 267 aaPredicted RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 TDGF1P13385 188 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 PSMB5P28074 263 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 COILP38432 576 aaPredicted RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 TGM4P49221 684 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 TDGF1P3P51864 188 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 ZNF138P52744 262 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 TAS2R46P59540 309 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 UBE2NP61088 152 aaKnown RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 IL5RAQ01344 420 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 REG3AQ06141 175 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 TOMM34Q15785 309 aaPredicted RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 GUCA2BQ16661 112 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 ZNF630Q2M218 657 aaPredicted RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 TTLL9Q3SXZ7 439 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 COX19Q49B96 90 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 PDZD11Q5EBL8 140 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 AVPI1Q5T686 147 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 FAM45BPQ6NSW5 357 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 Q6ZVH6 145 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 TMEM156Q8N614 296 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 ZNF525Q8N782 197 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 COX18Q8N8Q8 333 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 WDSUB1Q8N9V3 476 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 C11orf72Q8NBR9 251 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 KLHL30-AS1Q8NEE0 82 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 OR4K2Q8NGD2 314 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 OR5L1Q8NGL2 311 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 OR1S1Q8NH92 325 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 OR2AE1Q8NHA4 323 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 FAM45AQ8TCE6 357 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 RXFP2Q8WXD0 754 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 MARC2Q969Z3 335 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 DNAJC19Q96DA6 116 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 YIPF6Q96EC8 236 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 RNF185Q96GF1 192 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 Q96MT0 163 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 API5Q9BZZ5 524 aaKnown RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 EDA2RQ9HAV5 297 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 RRAGDQ9NQL2 400 aaPredicted RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 FGFR1OP2Q9NVK5 253 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 DDIT4Q9NX09 232 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 ANXA10Q9UJ72 324 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 RAB22AQ9UL26 194 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 NDRG2Q9UN36 371 aaKnown RBP2.82□□□□□ -1.96
TDP1-217ENST00000557782 MOKQ9UQ07 419 aa2.82□□□□□ -1.96
TDP1-217ENST00000557782 PCNX3Q9H6A9 2034 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 A0A087WWV3 80 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 PRSS44E7EML9 344 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 J3QLI3 93 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 CYTH3O43739 400 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 TNFSF13O75888 250 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 RPP14O95059 124 aaKnown RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 MPZL1O95297 269 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 KLF8O95600 359 aaPredicted RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 ATP6V1G2O95670 118 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 HSPB1P04792 205 aaKnown RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 ZDHHC11BP0C7U3 371 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 ZNF35P13682 527 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 ZNF30P17039 623 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 F8A1P23610 371 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 PSMB9P28065 219 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 TALDO1P37837 337 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 CDKN2BP42772 138 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 CYB561P49447 251 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 MEOX2P50222 304 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 CRIP2P52943 208 aaPredicted RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 HERVK_113P61574 105 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 SLC7A9P82251 487 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 CEACAM21Q3KPI0 293 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 HIGD2BQ4VC39 106 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 TMEM31Q5JXX7 168 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 OGFRL1Q5TC84 451 aaPredicted RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 STEAP4Q687X5 459 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 UGT2A3Q6UWM9 527 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 USP50Q70EL3 339 aaPredicted RBP2.81□□□□□ -1.96
TDP1-217ENST00000557782 PRSS58Q8IYP2 241 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 OR6N1Q8NGY5 312 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 RHOXF1Q8NHV9 184 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 NELFBQ8WX92 580 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 DCUN1D4Q92564 292 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 ESR2Q92731 530 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 FAM19A4Q96LR4 140 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 TMEM56Q96MV1 263 aa2.81□□□□□ -1.96
TDP1-217ENST00000557782 OR2M4Q96R27 311 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms