RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 C12orf43Q96C57 262 aaKnown RBP13.1□□□□□ -0.31
SCFD1-224ENST00000557713 REEP6Q96HR9 211 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 CDRT15Q96T59 188 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 PKP2Q99959 881 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 TLNRD1Q9H1K6 362 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 SEMA6AQ9H2E6 1030 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 ZNRD1Q9P1U0 126 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 ONECUT1Q9UBC0 465 aa13.1□□□□□ -0.31
SCFD1-224ENST00000557713 PRPF19Q9UMS4 504 aaKnown RBP13.1□□□□□ -0.31
SCFD1-224ENST00000557713 hCG_38984A0A1B0GV85 526 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 RNASEK-C17orf49H0YIS7 233 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 TNFRSF11BO00300 401 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 ACOT8O14734 319 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 CDIPTO14735 213 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 NDUFB3O43676 98 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 TIPRLO75663 272 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 TSPAN9O75954 239 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 FBP1P09467 338 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 CLUP10909 449 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 NAA10P41227 235 aaPredicted RBP13.09□□□□□ -0.31
SCFD1-224ENST00000557713 SLC15A1P46059 708 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 CX3CR1P49238 355 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 GSK3AP49840 483 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 TIGD6Q17RP2 521 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 LINC01590Q5TEZ4 76 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 PGAM4Q8N0Y7 254 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 GALNT4Q8N4A0 578 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 OR4Q3Q8NH05 313 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 C8orf46Q8TAG6 207 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 DCTN5Q9BTE1 182 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 TSSK6Q9BXA6 273 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 TOR3AQ9H497 397 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 SP140LQ9H930 580 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 SIRT7Q9NRC8 400 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 ZNF319Q9P2F9 582 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 CAB39Q9Y376 341 aaPredicted RBP13.09□□□□□ -0.31
SCFD1-224ENST00000557713 RHBDD3Q9Y3P4 386 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 WNK1Q9H4A3 2382 aa13.09□□□□□ -0.31
SCFD1-224ENST00000557713 TSPAN15O95858 294 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 ANXA2P07355 339 aaKnown RBP13.08□□□□□ -0.32
SCFD1-224ENST00000557713 BLVRAP53004 296 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 PRB3Q04118 309 aaPredicted RBP13.08□□□□□ -0.32
SCFD1-224ENST00000557713 EIF2B1Q14232 305 aaKnown RBP13.08□□□□□ -0.32
SCFD1-224ENST00000557713 STUMQ69YW2 141 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 CMTM4Q8IZR5 234 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 OR5T2Q8NGG2 359 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 OR52H1Q8NGJ2 320 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 RNF133Q8WVZ7 376 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 TNFRSF14Q92956 283 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 ITPKCQ96DU7 683 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 ABHD6Q9BV23 337 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 TBC1D23Q9NUY8 699 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 HAO2Q9NYQ3 351 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 VPREB3Q9UKI3 123 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 BAIAP2Q9UQB8 552 aa13.08□□□□□ -0.32
SCFD1-224ENST00000557713 ZNF816-ZNF321PA0A0X1KG74 233 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 NPFFO15130 113 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 CCNB2O95067 398 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 APOC1P02654 83 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 HSD11B1P28845 292 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 TGFBR2P37173 567 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 DLX1P56177 255 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 GUCA2AQ02747 115 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 IKZF1Q13422 519 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 HSP90B2PQ58FF3 399 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
SCFD1-224ENST00000557713 C1orf122Q6ZSJ8 110 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 FAM57BQ71RH2 274 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 CSNK2A3Q8NEV1 391 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 OR6K6Q8NGW6 343 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 AMELYQ99218 206 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 DNTTIP1Q9H147 329 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 DNAJB11Q9UBS4 358 aa13.07□□□□□ -0.32
SCFD1-224ENST00000557713 A0A1W2PRD5 423 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 A0A1W2PRF3 423 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 A0A1W2PRM7 423 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 SNX3O60493 162 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 SELLP14151 372 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 CFL1P23528 166 aaKnown RBP13.06□□□□□ -0.32
SCFD1-224ENST00000557713 EEF1B2P24534 225 aaKnown RBP13.06□□□□□ -0.32
SCFD1-224ENST00000557713 MAGEA2P43356 314 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 ZNF121P58317 390 aaPredicted RBP13.06□□□□□ -0.32
SCFD1-224ENST00000557713 PPP1R8Q12972 351 aaKnown RBP13.06□□□□□ -0.32
SCFD1-224ENST00000557713 KLRD1Q13241 179 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 SPATS1Q496A3 300 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 LRRC10Q5BKY1 277 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 SLC35E4Q6ICL7 350 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 ZNF788Q6ZQV5 615 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 AQP11Q8NBQ7 271 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 OR10Z1Q8NGY1 313 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 FAM110DQ8TAY7 271 aaPredicted RBP13.06□□□□□ -0.32
SCFD1-224ENST00000557713 RAB3IPQ96QF0 476 aaPredicted RBP13.06□□□□□ -0.32
SCFD1-224ENST00000557713 INTS14Q96SY0 518 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 MICU1Q9BPX6 476 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 WDR13Q9H1Z4 485 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 MED4Q9NPJ6 270 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 ARMC1Q9NVT9 282 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 DNAJC27Q9NZQ0 273 aa13.06□□□□□ -0.32
SCFD1-224ENST00000557713 MPC1Q9Y5U8 109 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms