RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 BPIFB6Q8NFQ5 453 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 OR51E1Q8TCB6 317 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 Q8TCH9 128 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 RAB1CQ92928 201 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 PELI1Q96FA3 418 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 LYZL4Q96KX0 146 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 C4orf36Q96KX1 117 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 HIST1H2AAQ96QV6 131 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 OR2V2Q96R30 315 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 MICU1Q9BPX6 476 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 ACOXLQ9NUZ1 547 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 BABAM2Q9NXR7 383 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 ENPP5Q9UJA9 477 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 GTF2A1LQ9UNN4 478 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 PPP1R3CQ9UQK1 317 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 V9GYS6 101 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 CELSR1Q9NYQ6 3014 aa11.61□□□□□ -0.55
SHMT2-234ENST00000557703 TMEM210A6NLX4 147 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 CLDN25C9JDP6 229 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 SLC1A7O00341 560 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 MLNRO43193 412 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 SYT7O43581 403 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 RP2O75695 350 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 NCR1O76036 304 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 SERPINA3P01011 423 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 HEXAP06865 529 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 CD99P14209 185 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 CA6P23280 308 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 CFHR2P36980 270 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 BDH1Q02338 343 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 MFGE8Q08431 387 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-234ENST00000557703 TNK1Q13470 666 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 ALKBH1Q13686 389 aaKnown RBP11.6□□□□□ -0.55
SHMT2-234ENST00000557703 TSTQ16762 297 aaKnown RBP11.6□□□□□ -0.55
SHMT2-234ENST00000557703 GFOD2Q3B7J2 385 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 FAM76BQ5HYJ3 339 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 LAIR2Q6ISS4 152 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 RPL22L1Q6P5R6 122 aaKnown RBP11.6□□□□□ -0.55
SHMT2-234ENST00000557703 LURAP1LQ8IV03 231 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 OR8S1Q8NH09 359 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 PP6455Q8WZ26 134 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 MEGF10Q96KG7 1140 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 C18orf12Q96KH6 178 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 ADAT1Q9BUB4 502 aaKnown RBP11.6□□□□□ -0.55
SHMT2-234ENST00000557703 CDCA4Q9BXL8 241 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 TTTY10Q9BZA0 68 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 COMMD4Q9H0A8 199 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 DUSP21Q9H596 190 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 TRIM36Q9NQ86 728 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 MED13LQ71F56 2210 aa11.6□□□□□ -0.55
SHMT2-234ENST00000557703 VPS13CQ709C8 3753 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 CSPG4Q6UVK1 2322 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 A0A1B0GTI1 187 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 C5orf63A6NC05 138 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 OR5B21A6NL26 309 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 MAGEB4O15481 346 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-234ENST00000557703 XPNPEP2O43895 674 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 CD1AP06126 327 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 CDK1P06493 297 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 USF1P22415 310 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-234ENST00000557703 ACKR3P25106 362 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 GPR6P46095 362 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-234ENST00000557703 SLC35A2P78381 396 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 CEACAM21Q3KPI0 293 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 WDR38Q5JTN6 314 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 CLVS2Q5SYC1 327 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 TMEM42Q69YG0 159 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 OR5A2Q8NGI9 324 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 OR11L1Q8NGX0 322 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 THRSPQ92748 146 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 COX4I2Q96KJ9 171 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 RTL8AQ9BWD3 113 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 PAPOLGQ9BWT3 736 aaKnown RBP11.59□□□□□ -0.55
SHMT2-234ENST00000557703 FN3KRPQ9HA64 309 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 PLEKHA1Q9HB21 404 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 NEK6Q9HC98 313 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 GCM1Q9NP62 436 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 ZNF275Q9NSD4 429 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-234ENST00000557703 FRRS1LQ9P0K9 344 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 HHLA2Q9UM44 414 aa11.59□□□□□ -0.55
SHMT2-234ENST00000557703 IGHV4-30-2A0A087WSY4 118 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 OR4C45A6NMZ5 311 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 MYL12BO14950 172 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 GATBO75879 557 aaKnown RBP11.58□□□□□ -0.56
SHMT2-234ENST00000557703 ALX3O95076 343 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 IRF2P14316 349 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 CRHBPP24387 322 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 COL8A2P25067 703 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 ETV1P50549 477 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 CHN2P52757 468 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 WNT4P56705 351 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 ACSM1Q08AH1 577 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 MAB21L1Q13394 359 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 AHSA2Q719I0 299 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 ZDHHC23Q8IYP9 409 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 PRSS35Q8N3Z0 413 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 OR10AD1Q8NGE0 317 aa11.58□□□□□ -0.56
SHMT2-234ENST00000557703 OR14K1Q8NGZ2 314 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms