RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 ARPC2O15144 300 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 NDUFB3O43676 98 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 TIPRLO75663 272 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 TSPAN9O75954 239 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 ANXA2P07355 339 aaKnown RBP15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 HSD17B1P14061 328 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 SELLP14151 372 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 PRDX6P30041 224 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 GRB2P62993 217 aaKnown RBP15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 GUCA2AQ02747 115 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 EGR3Q06889 387 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 KLRD1Q13241 179 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 IKZF1Q13422 519 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 TEX30Q5JUR7 227 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 STUMQ69YW2 141 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 Q8N7P7 452 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 NSMCE2Q96MF7 247 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 NMNAT2Q9BZQ4 307 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 TLNRD1Q9H1K6 362 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 TBC1D23Q9NUY8 699 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 DNAJB11Q9UBS4 358 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 LYVE1Q9Y5Y7 322 aa15.01□□□□□ -0.01
VIPAS39-209ENST00000556909 ZNF816-ZNF321PA0A0X1KG74 233 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 A0A1W2PRD5 423 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 A0A1W2PRF3 423 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 A0A1W2PRM7 423 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 GPR37O15354 613 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 CLUP10909 449 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 SPI1P17947 270 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 AMY2BP19961 511 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 MSX2P35548 267 aaPredicted RBP15□□□□□ -0.01
VIPAS39-209ENST00000556909 SLC25A1P53007 311 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 KLHL12Q53G59 568 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 ZNF770Q6IQ21 691 aaPredicted RBP15□□□□□ -0.01
VIPAS39-209ENST00000556909 PRSS45Q7RTY3 260 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 OR6K6Q8NGW6 343 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 C8orf46Q8TAG6 207 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 SGK3Q96BR1 496 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 DCTN5Q9BTE1 182 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 PAPOLGQ9BWT3 736 aaKnown RBP15□□□□□ -0.01
VIPAS39-209ENST00000556909 TOR3AQ9H497 397 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 ZNF446Q9NWS9 450 aa15□□□□□ -0.01
VIPAS39-209ENST00000556909 PLXNB1O43157 2135 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 CDIPTO14735 213 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 KRT36O76013 467 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 EEF1B2P24534 225 aaKnown RBP14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 HSD11B1P28845 292 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 SAA4P35542 130 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 TGFBR2P37173 567 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 NAA10P41227 235 aaPredicted RBP14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 SLC15A1P46059 708 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 TGM4P49221 684 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 GSK3AP49840 483 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 EIF2B1Q14232 305 aaKnown RBP14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 LRRC10Q5BKY1 277 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 RASSF6Q6ZTQ3 369 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 PNKDQ8N490 385 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 OR4Q3Q8NH05 313 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 ITPKCQ96DU7 683 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 RHBDD3Q9Y3P4 386 aa14.99□□□□□ -0.01
VIPAS39-209ENST00000556909 TNFRSF11BO00300 401 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 CSF1P09603 554 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 GNALP38405 381 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 HMGA2P52926 109 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 ZNF121P58317 390 aaPredicted RBP14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 GMFBP60983 142 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 GFOD2Q3B7J2 385 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 SAMD4BQ5PRF9 694 aaKnown RBP14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 ATPAF1Q5TC12 328 aaPredicted RBP14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 LINC01590Q5TEZ4 76 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 FAM57BQ71RH2 274 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 LINC00471Q8N535 108 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 CSNK2A3Q8NEV1 391 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 OR5T2Q8NGG2 359 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 OR52H1Q8NGJ2 320 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 OR5R1Q8NH85 324 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 H1FXQ92522 213 aaKnown RBP14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 TNFRSF14Q92956 283 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 TSSK6Q9BXA6 273 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 SNTG1Q9NSN8 517 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 HAO2Q9NYQ3 351 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 DNAJC27Q9NZQ0 273 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 ZNF319Q9P2F9 582 aa14.98□□□□□ -0.01
VIPAS39-209ENST00000556909 MEIOCA2RUB1 952 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 NKX6-3A6NJ46 265 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 SOX14O95416 240 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 PAHP00439 452 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 GASTP01350 101 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 CFL1P23528 166 aaKnown RBP14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 PGAM4Q8N0Y7 254 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 GALNT4Q8N4A0 578 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 AQP11Q8NBQ7 271 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 RNF133Q8WVZ7 376 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 RAB3IPQ96QF0 476 aaPredicted RBP14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 MICU1Q9BPX6 476 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 ELAC2Q9BQ52 826 aaKnown RBP14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 ABHD6Q9BV23 337 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 DNTTIP1Q9H147 329 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 WDR13Q9H1Z4 485 aa14.97□□□□□ -0.01
VIPAS39-209ENST00000556909 PPA2Q9H2U2 334 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms