RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SERPINA6P08185 405 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 KRTAP1-4P0C5Y4 121 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 TRAPPC2P0DI81 140 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 TRAPPC2BP0DI82 140 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CT45A6P0DMU7 189 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CT45A5P0DMU8 189 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CT45A7P0DMV0 189 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 IGHV3-43DP0DP04 118 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CNR1P21554 472 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CD40LGP29965 261 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 RCVRNP35243 200 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 NUP62P37198 522 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 TALDO1P37837 337 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CRISP1P54107 249 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 FGF8P55075 233 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 WNT4P56705 351 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 POLR2GP62487 172 aaKnown RBP eCLIP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 SLC25A11Q02978 314 aaKnown RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 KDSRQ06136 332 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 BNIP2Q12982 314 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 POU6F1Q14863 301 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 OR7A5Q15622 319 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 IL17AQ16552 155 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CT45A1Q5HYN5 189 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 THEM4Q5T1C6 240 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 GPR107Q5VW38 600 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 ANKRD22Q5VYY1 191 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 PLEKHG7Q6ZR37 379 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 NT5DC3Q86UY8 548 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 PLCZ1Q86YW0 608 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 ZNF584Q8IVC4 421 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 C11orf53Q8IXP5 236 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 STX19Q8N4C7 294 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 FAM71E2Q8N5Q1 922 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 SUMF2Q8NBJ7 301 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 PROKR2Q8NFJ6 384 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 OR5T3Q8NGG3 340 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CT45A3Q8NHU0 189 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CDC26Q8NHZ8 85 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 LKAAEAR1Q8TD35 194 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 BLOC1S5Q8TDH9 187 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 PYDC1Q8WXC3 89 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 TOP1MTQ969P6 601 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 FAM3DQ96BQ1 224 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 DNAJC19Q96DA6 116 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 SLC35E1Q96K37 410 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 OR2M2Q96R28 347 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 DOK1Q99704 481 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 APOL4Q9BPW4 351 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 MICU1Q9BPX6 476 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 DCUN1D5Q9BTE7 237 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 KIFC1Q9BW19 673 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 CDC42EP4Q9H3Q1 356 aaKnown RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 ARMC7Q9H6L4 198 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 TDRD3Q9H7E2 651 aaKnown RBP3.03□□□□□ -1.92
PRPF39-210ENST00000556718 RETNQ9HD89 108 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 DYRK4Q9NR20 520 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 ZNF226Q9NYT6 803 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 IL17CQ9P0M4 197 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 ZNF225Q9UK10 706 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 QRICH2Q9H0J4 1663 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 RAPGEF6Q8TEU7 1601 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 DLC1Q96QB1 1528 aa3.03□□□□□ -1.92
PRPF39-210ENST00000556718 RTL9Q8NET4 1388 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 PALLDQ8WX93 1383 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 A0A087X0T9 212 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 CIB4A0PJX0 185 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 SERPINE3A8MV23 424 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 KRTAP4-16G5E9R7 235 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 TOR1AO14656 332 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 BCKDKO14874 412 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 ZBTB5O15062 677 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 NUPL2O15504 423 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 ICOSLGO75144 302 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 SRP72O76094 671 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 SNAP29O95721 258 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 CCNE2O96020 404 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 HBE1P02100 147 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 MBP02144 154 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 ARG1P05089 322 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 S100A9P06702 114 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 RETP07949 1114 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 TFPTP0C1Z6 253 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 ZDHHC11BP0C7U3 371 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 FOLR1P15328 257 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 WARSP23381 471 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 CD82P27701 267 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 ERP29P30040 261 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 RPA3P35244 121 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 HRH1P35367 487 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 GDI2P50395 445 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 PSMD4P55036 377 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 HADHBP55084 474 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 AP1S2P56377 157 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 VSX2P58304 361 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 RPL10AP62906 217 aaKnown RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 IRF8Q02556 426 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 ART3Q13508 389 aa3.02□□□□□ -1.93
PRPF39-210ENST00000556718 ZNF630Q2M218 657 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-210ENST00000556718 KLHL12Q53G59 568 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms