RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 TNFAIP6P98066 277 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 ACSM1Q08AH1 577 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 PRDX4Q13162 271 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 DMRTC1Q5HYR2 192 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 KCTD8Q6ZWB6 473 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 OR8S1Q8NH09 359 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 IGFBPL1Q8WX77 278 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 RGP1Q92546 391 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 FGGYQ96C11 551 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 OPALINQ96PE5 141 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 TMED9Q9BVK6 235 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 ZDHHC8Q9ULC8 765 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 TRIM64A6NGJ6 449 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 F5H5P2 479 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 MLNRO43193 412 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 ZNF12P17014 697 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 PCMT1P22061 227 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 MLLT11Q13015 90 aaPredicted RBP11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 DEFB113Q30KQ7 82 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 ARMCX4Q5H9R4 360 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 CEP78Q5JTW2 689 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 RPS4Y2Q8TD47 263 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 GPR148Q8TDV2 347 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 FCGR1BQ92637 280 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 TMEM203Q969S6 136 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 PGLYRP3Q96LB9 341 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 VCX3AQ9NNX9 186 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 GPR173Q9NS66 373 aa11.95□□□□□ -0.5
VIPAS39-208ENST00000556412 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 ANXA2P2A6NMY6 339 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 PLPP2O43688 288 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 INMTO95050 263 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 RPSAP08865 295 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 OCM2P0CE71 109 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 PTH2RP49190 550 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 PCGF3Q3KNV8 242 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 PLCXD3Q63HM9 321 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 MOB3CQ70IA8 216 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 ZDHHC23Q8IYP9 409 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 CCDC54Q8NEL0 328 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 ADAT3Q96EY9 351 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 HIST1H2AAQ96QV6 131 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 DIRC2Q96SL1 478 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 SLC22A4Q9H015 551 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 SAP30LQ9HAJ7 183 aa11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 NOP16Q9Y3C1 178 aaKnown RBP11.94□□□□□ -0.5
VIPAS39-208ENST00000556412 ABCA4P78363 2273 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 GMDSO60547 372 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 NCR1O76036 304 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 CST4P01036 141 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 NRASP01111 189 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 OCMP0CE72 109 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 CARTPTQ16568 116 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 YIF1BQ5BJH7 314 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 CLVS2Q5SYC1 327 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 UBE2UQ5VVX9 321 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 NPRL2Q8WTW4 380 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 NINJ1Q92982 152 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 OR2V2Q96R30 315 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 EGLN1Q9GZT9 426 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 ISYNA1Q9NPH2 558 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 ZNF275Q9NSD4 429 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 BEX4Q9NWD9 120 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 TREM2Q9NZC2 230 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 MPC1Q9Y5U8 109 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 ANKRD61A6NGH8 418 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 SSX4O60224 188 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 CDC14BO60729 498 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 SERPINA3P01011 423 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 IGHV4-39P01824 125 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 HPXP02790 462 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 EFNA4P52798 201 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 SPRNQ5BIV9 151 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 FAM209AQ5JX71 171 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 ZBTB37Q5TC79 503 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 ITLN1Q8WWA0 313 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 NEU4Q8WWR8 484 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 OR14A2Q96R54 314 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 ZNF701Q9NV72 531 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 NKIRAS2Q9NYR9 191 aa11.93□□□□□ -0.5
VIPAS39-208ENST00000556412 LRBAP50851 2863 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 ROS1P08922 2347 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 A0A1W2PPK0 400 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 CD2P06729 351 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 GRPP07492 148 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 CPEP16870 476 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 SRP9P49458 86 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 RPS25P62851 125 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 TPBGQ13641 420 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 Q6ZSR3 168 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 PHC2Q8IXK0 858 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 OR13C9Q8NGT0 318 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 TRMT10AQ8TBZ6 339 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 TMEM106AQ96A25 262 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 RNF170Q96K19 258 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 MEGF10Q96KG7 1140 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 MICU1Q9BPX6 476 aa11.92□□□□□ -0.5
VIPAS39-208ENST00000556412 RTL8AQ9BWD3 113 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms