RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PGAP1Q75T13 922 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 DHDDSQ86SQ9 333 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 NRMQ8IXM6 262 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 GJC3Q8NFK1 279 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 SLC26A10Q8NG04 563 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 ZNF570Q96NI8 536 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 GAFA1Q96PS6 74 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 CGREF1Q99674 301 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 NUAK2Q9H093 628 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 NMNAT1Q9HAN9 279 aaPredicted RBP7.3□□□□□ -1.24
PRKCH-218ENST00000555628 NRIP3Q9NQ35 241 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 TCF19Q9Y242 345 aa7.3□□□□□ -1.24
PRKCH-218ENST00000555628 NOP16Q9Y3C1 178 aaKnown RBP7.3□□□□□ -1.24
PRKCH-218ENST00000555628 LSM4Q9Y4Z0 139 aaKnown RBP7.3□□□□□ -1.24
PRKCH-218ENST00000555628 E9PQ18 207 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 TXNDC12O95881 172 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 TFF1P04155 84 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 MED14OSP0DP75 135 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 FAHP16930 419 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 SDHAP31040 664 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 GGT2P36268 569 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 OR1E2P47887 323 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 SLC9A3P48764 834 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 SLC18A1P54219 525 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 CAV3P56539 151 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 NFYCQ13952 458 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 CNN3Q15417 329 aaKnown RBP7.29□□□□□ -1.24
PRKCH-218ENST00000555628 MICBQ29980 383 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 KRT71Q3SY84 523 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 TMPRSS11FQ6ZWK6 438 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 SLC36A1Q7Z2H8 476 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 RNF144BQ7Z419 303 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 OAFQ86UD1 273 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 OFCC1Q8IZS5 231 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 MREGQ8N565 214 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 DTX3Q8N9I9 347 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 OR2AE1Q8NHA4 323 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 LRRC29Q8WV35 223 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 SPRYD4Q8WW59 207 aaPredicted RBP7.29□□□□□ -1.24
PRKCH-218ENST00000555628 RASSF5Q8WWW0 418 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 PRRC1Q96M27 445 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 TSSK2Q96PF2 358 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 ATF6BQ99941 703 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 EBF4Q9BQW3 602 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 DNTTIP1Q9H147 329 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 MUC13Q9H3R2 512 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 CENPHQ9H3R5 247 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 GRHPRQ9UBQ7 328 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 CYB5R1Q9UHQ9 305 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 RPS6KA6Q9UK32 745 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 SF3B6Q9Y3B4 125 aaKnown RBP7.29□□□□□ -1.24
PRKCH-218ENST00000555628 ALMS1Q8TCU4 4167 aa7.29□□□□□ -1.24
PRKCH-218ENST00000555628 A0A087WUU8 490 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 hCG_1807616A0A1W2PRN6 198 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 A0A1W2PRX2 142 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 EFCAB9A8MZ26 197 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 FXYD1O00168 92 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 RGS16O15492 202 aaPredicted RBP7.28□□□□□ -1.24
PRKCH-218ENST00000555628 NDUFB3O43676 98 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 SYNGR1O43759 233 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 PTP4A3O75365 173 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 GRPP07492 148 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 VIMP08670 466 aaKnown RBP7.28□□□□□ -1.24
PRKCH-218ENST00000555628 PSKH1P11801 424 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 ATF4P18848 351 aaPredicted RBP7.28□□□□□ -1.24
PRKCH-218ENST00000555628 CDKN2AP42771 156 aaKnown RBP7.28□□□□□ -1.24
PRKCH-218ENST00000555628 STX1BP61266 288 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 ECH1Q13011 328 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 GLYATL3Q5SZD4 288 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 PGM2L1Q6PCE3 622 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 MRPL21Q7Z2W9 205 aaKnown RBP7.28□□□□□ -1.24
PRKCH-218ENST00000555628 ADCK1Q86TW2 530 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 OR56B2PQ8NGI1 322 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 OR10A6Q8NH74 314 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 ANGPTL6Q8NI99 470 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 MUC7Q8TAX7 377 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 SPSB4Q96A44 273 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 ANAPC16Q96DE5 110 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 DUS3LQ96G46 650 aaKnown RBP7.28□□□□□ -1.24
PRKCH-218ENST00000555628 RAB3IPQ96QF0 476 aaPredicted RBP7.28□□□□□ -1.24
PRKCH-218ENST00000555628 NKX3-1Q99801 234 aaPredicted RBP7.28□□□□□ -1.24
PRKCH-218ENST00000555628 WDR13Q9H1Z4 485 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 ZNF222Q9UK12 451 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 BAG5Q9UL15 447 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 AURKCQ9UQB9 309 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 SIGLEC7Q9Y286 467 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 PCDHGB5Q9Y5G0 923 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 SNX13Q9Y5W8 968 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 CAPN7Q9Y6W3 813 aa7.28□□□□□ -1.24
PRKCH-218ENST00000555628 TMEM120BA0PK00 339 aa7.27□□□□□ -1.25
PRKCH-218ENST00000555628 A6NLC8 198 aa7.27□□□□□ -1.25
PRKCH-218ENST00000555628 F5H5K5 113 aa7.27□□□□□ -1.25
PRKCH-218ENST00000555628 H0YHG0 523 aa7.27□□□□□ -1.25
PRKCH-218ENST00000555628 XKRYO14609 159 aa7.27□□□□□ -1.25
PRKCH-218ENST00000555628 SIGLEC5O15389 551 aa7.27□□□□□ -1.25
PRKCH-218ENST00000555628 ANGPTL7O43827 346 aa7.27□□□□□ -1.25
PRKCH-218ENST00000555628 LCATP04180 440 aa7.27□□□□□ -1.25
PRKCH-218ENST00000555628 PF4V1P10720 104 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms