RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CLDN14O95500 239 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 PPP3CBP16298 524 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 ATF1P18846 271 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 FSTP19883 344 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 MPV17P39210 176 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 RAD52P43351 418 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 BMXP51813 675 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 CLDN12P56749 244 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 PPP3R1P63098 170 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 ALKBH6Q3KRA9 238 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 ZNF404Q494X3 552 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 TMEM255AQ5JRV8 349 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 XKRXQ6PP77 449 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 VHLLQ6RSH7 139 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 OR5AS1Q8N127 324 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 OR1M1Q8NGA1 313 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 OR52N4Q8NGI2 321 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 PIGCQ92535 297 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 MARS2Q96GW9 593 aaKnown RBP8.77□□□□□ -1.01
SRP54-208ENST00000555557 MOV10Q9HCE1 1003 aaKnown RBP8.77□□□□□ -1.01
SRP54-208ENST00000555557 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
SRP54-208ENST00000555557 CGGBP1Q9UFW8 167 aaPredicted RBP8.77□□□□□ -1.01
SRP54-208ENST00000555557 NDRG3Q9UGV2 375 aa8.77□□□□□ -1.01
SRP54-208ENST00000555557 HEATR1Q9H583 2144 aaKnown RBP8.77□□□□□ -1.01
SRP54-208ENST00000555557 SPTBN1Q01082 2364 aaKnown RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 FUOMA2VDF0 154 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 CD300LBA8K4G0 201 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 NOTOA8MTQ0 251 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 CTDSP2O14595 271 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 ABCD4O14678 606 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 PDCD5O14737 125 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 SULT1B1O43704 296 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 GMDSO60547 372 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 CLPXO76031 633 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 PAHP00439 452 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 OCMP0CE72 109 aaPredicted RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 RAB3AP20336 220 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 S100A1P23297 94 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 CFL1P23528 166 aaKnown RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 BDKRB2P30411 391 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 THBS4P35443 961 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 FABP6P51161 128 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 BCAP31P51572 246 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 BSPH1Q075Z2 132 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 PSG7Q13046 419 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 SNTB2Q13425 540 aaKnown RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 MSMPQ1L6U9 139 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 C3orf36Q3SXR2 165 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 ZNF529Q6P280 563 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 TMEM108Q6UXF1 575 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 ZNF808Q8N4W9 903 aaPredicted RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 TRMT10AQ8TBZ6 339 aaKnown RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 KLF14Q8TD94 323 aaPredicted RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 DVL3Q92997 716 aaPredicted RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 LRRC46Q96FV0 321 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 CHST5Q9GZS9 411 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 GPR160Q9UJ42 338 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 TUBAL3A6NHL2 446 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 IFITM5A6NNB3 132 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 DHRS7CA6NNS2 312 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 ZNF850A8MQ14 1090 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 J3QW42 95 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 RNF224P0DH78 156 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 PTAFRP25105 342 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 THBS2P35442 1172 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 FBXW12Q6X9E4 464 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 JAGN1Q8N5M9 183 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 CCDC54Q8NEL0 328 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 PIGTQ969N2 578 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 DACH2Q96NX9 599 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 PAPOLGQ9BWT3 736 aaKnown RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 BCL2L14Q9BZR8 327 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 NXF2Q9GZY0 626 aaKnown RBP8.76□□□□□ -1.01
SRP54-208ENST00000555557 TMEM138Q9NPI0 162 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 COMMD3Q9UBI1 195 aa8.76□□□□□ -1.01
SRP54-208ENST00000555557 ZNF816-ZNF321PA0A0X1KG74 233 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 C19orf84I3L1E1 186 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 NRASP01111 189 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 HCKP08631 526 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 PLA2G2AP14555 144 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 SNRPBP14678 240 aaKnown RBP8.75□□□□□ -1.01
SRP54-208ENST00000555557 AGAP20933 346 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 NKX6-1P78426 367 aaPredicted RBP8.75□□□□□ -1.01
SRP54-208ENST00000555557 SORDQ00796 357 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 CLVS2Q5SYC1 327 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 DDI2Q5TDH0 399 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 TMEM42Q69YG0 159 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 ADAM5Q6NVV9 412 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 SLC22A25Q6T423 547 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 MOB3CQ70IA8 216 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 LRP11Q86VZ4 500 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 TBC1D15Q8TC07 691 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 PP6455Q8WZ26 134 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 RFT1Q96AA3 541 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 C10orf35Q96D05 121 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 HAVCR1Q96D42 359 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 PLPPR2Q96GM1 343 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 PALMDQ9NP74 551 aa8.75□□□□□ -1.01
SRP54-208ENST00000555557 FAM230AA0A1W2PPH8 454 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 AIPO00170 330 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms