RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FGF17O60258 216 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 DOK2O60496 412 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 EIF4E2O60573 245 aaKnown RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 SPDEFO95238 335 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 APOC1P02654 83 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 HRGP04196 525 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 S100A8P05109 93 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ISG15P05161 165 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 GYPBP06028 91 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ERCC1P07992 297 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 CLUP10909 449 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 RNH1P13489 461 aaKnown RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ALOX5APP20292 161 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ACHEP22303 614 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 FASLGP48023 281 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 POU3F4P49335 361 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 PRKXP51817 358 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 NR0B1P51843 470 aaKnown RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 B2MP61769 119 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 DCAF7P61962 342 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ERV3-1Q14264 604 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 KIR2DS5Q14953 304 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 TMEM255AQ5JRV8 349 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 TEX30Q5JUR7 227 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 C10orf91Q5T1B1 145 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ATP1A1-AS1Q5TC04 95 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 NSUN5P2Q63ZY6 315 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ELP2Q6IA86 826 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 FAM166AQ6J272 317 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 JMJD6Q6NYC1 403 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 FBXO42Q6P3S6 717 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 WDR74Q6RFH5 385 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 KIRREL2Q6UWL6 708 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 FAM122BQ7Z309 247 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 TIPARPQ7Z3E1 657 aaKnown RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 LDLRAD3Q86YD5 345 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF584Q8IVC4 421 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ZNF679Q8IYX0 411 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 CA13Q8N1Q1 262 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 GALNT16Q8N428 558 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 STEAP2Q8NFT2 490 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 OR1M1Q8NGA1 313 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 OR52R1Q8NGF1 315 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 OR51S1Q8NGJ8 323 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 OR5M1Q8NGP8 315 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 OTOSQ8NHW6 89 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ELP5Q8TE02 316 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 RNF128Q8TEB7 428 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 TSEN15Q8WW01 171 aaKnown RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 RGP1Q92546 391 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 RIT1Q92963 219 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 C3orf49Q96BT1 292 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 LRRC46Q96FV0 321 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 CXorf58Q96LI9 332 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 VSTM2LQ96N03 204 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 OR8B4Q96RC9 309 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 NMNAT3Q96T66 252 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 TSNAXQ99598 290 aaKnown RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 VKORC1Q9BQB6 163 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 UQCC2Q9BRT2 126 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 NMES1Q9C002 83 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 CDCP1Q9H5V8 836 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 BEX1Q9HBH7 125 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 MMP25Q9NPA2 562 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 UBQLN4Q9NRR5 601 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 SLC22A11Q9NSA0 550 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 ANKRD10Q9NXR5 420 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 SPHK1Q9NYA1 384 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 MLXQ9UH92 298 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 MRM2Q9UI43 246 aaKnown RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 IKZF2Q9UKS7 526 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 COPS3Q9UNS2 423 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 DHDHQ9UQ10 334 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 MEMO1Q9Y316 297 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 PCYT1BQ9Y5K3 369 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 MRPS18BQ9Y676 258 aaKnown RBP5.23□□□□□ -1.57
VPS33B-203ENST00000554264 LRP4O75096 1905 aa5.23□□□□□ -1.57
VPS33B-203ENST00000554264 TEP1Q99973 2627 aaKnown RBP5.22□□□□□ -1.57
VPS33B-203ENST00000554264 TRAV18A0A075B6X5 111 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 A0A0B4J203 849 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 TEX13DA0A0J9YY54 714 aaPredicted RBP5.22□□□□□ -1.57
VPS33B-203ENST00000554264 A0A1W2PPK0 400 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 LOC390937A0A1W2PQ73 354 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 TMEM72A0PK05 275 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 TMEM218A2RU14 115 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 WIPF3A6NGB9 483 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 TVP23AA6NH52 213 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 A6NIZ1 184 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 OR52A4PA6NMU1 304 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 OR2AT4A6NND4 320 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 FAM25EA8MYX2 175 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 F8VVB4 439 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 F8VWA3 439 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 H0YGG7 62 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 DNASE2O00115 360 aaPredicted RBP5.22□□□□□ -1.57
VPS33B-203ENST00000554264 FGF16O43320 207 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 SNRNP200O75643 2136 aaKnown RBP5.22□□□□□ -1.57
VPS33B-203ENST00000554264 DUS4LO95620 317 aaKnown RBP5.22□□□□□ -1.57
VPS33B-203ENST00000554264 CLDN1O95832 211 aa5.22□□□□□ -1.57
VPS33B-203ENST00000554264 IGHMP01871 453 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms