RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 LRRC10Q5BKY1 277 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 PDZD11Q5EBL8 140 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 CLVS2Q5SYC1 327 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 ANKRD22Q5VYY1 191 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 FRMPD2BQ6IN97 320 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 FAM173BQ6P4H8 233 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 Q6ZT83 130 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 FAM92BQ6ZTR7 304 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 LINC00173Q6ZV60 143 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 STX12Q86Y82 276 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 BLIDQ8IZY5 108 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 PNKDQ8N490 385 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 KLHL30-AS1Q8NEE0 82 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 OR2L5Q8NG80 312 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 OR10AD1Q8NGE0 317 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 OR6X1Q8NH79 312 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 OR2AE1Q8NHA4 323 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 ZNF461Q8TAF7 563 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 ERMNQ8TAM6 284 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 DYNC2LI1Q8TCX1 351 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 DCUN1D4Q92564 292 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 CDS1Q92903 461 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 CPNE4Q96A23 557 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 CREB3L1Q96BA8 519 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 DNAJC19Q96DA6 116 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 DGCR14Q96DF8 476 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 ZMYND19Q96E35 227 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 FCRL1Q96LA6 429 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 RNF145Q96MT1 663 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 TMEM56Q96MV1 263 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 RANBP9Q96S59 729 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 ZNF184Q99676 751 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 SH3GL3Q99963 347 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 APOL4Q9BPW4 351 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 SELENOSQ9BQE4 189 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 RSG1Q9BU20 258 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 MRPS26Q9BYN8 205 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 SLC25A22Q9H936 323 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 ABCB9Q9NP78 766 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 TREX1Q9NSU2 369 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 TAS2R13Q9NYV9 303 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 UVRAGQ9P2Y5 699 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 XCL2Q9UBD3 114 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 MTFP1Q9UDX5 166 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 APOBEC3BQ9UH17 382 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 ATPIF1Q9UII2 106 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 NDRG2Q9UN36 371 aaKnown RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 MOKQ9UQ07 419 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 PRELID1Q9Y255 219 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 AP3M1Q9Y2T2 418 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 HEBP2Q9Y5Z4 205 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 KCNE3Q9Y6H6 103 aa1.67□□□□□ -2.14
SRP54-204ENST00000553923 POLR3AO14802 1390 aaPredicted RBP1.67□□□□□ -2.14
SRP54-204ENST00000553923 MAP3K15Q6ZN16 1313 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RAD50Q92878 1312 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MAPK8IP3Q9UPT6 1336 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 FHOD3Q2V2M9 1422 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 IGLV8-61A0A075B6I0 122 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 SMIM26A0A096LP01 95 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 IGLV1-36A0A0B4J1U3 117 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 A0A0B4J2E0 115 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 SLC5A10A0PJK1 596 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 FTCDNL1E5RQL4 147 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 F5H5T6 163 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 J3QLI3 93 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 M0R1B8 84 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 ZNF593O00488 134 aaPredicted RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 PFDN6O15212 129 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 SLC16A4O15374 487 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 HPGDSO60760 199 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RP2O75695 350 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MPZL1O95297 269 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 C6orf47O95873 294 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 SLC35G6P0C7Q6 338 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 THRAP10827 490 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 ICAM2P13598 275 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 NQO1P15559 274 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 KLK2P20151 261 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RAB3BP20337 219 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 LOXP28300 417 aaPredicted RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 RBMXP38159 391 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 P2RY4P51582 365 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 FGF8P55075 233 aaPredicted RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 CDKN2DP55273 166 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 CLDN12P56749 244 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 OR10A3P58181 314 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MTPNP58546 118 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 AP3S2P59780 193 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RAB8AP61006 207 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MAGOHP61326 146 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 TIMM10P62072 90 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RPL10AP62906 217 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 RPL18AQ02543 176 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 ZNF763Q0D2J5 394 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MED21Q13503 144 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RGNQ15493 299 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 SNRNP35Q16560 246 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 GOLGA7BQ2TAP0 167 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 TMEM249Q2WGJ8 235 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 ACTBL2Q562R1 376 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms