RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 TSPAN31Q12999 210 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 EIF2B1Q14232 305 aaKnown RBP8.19□□□□□ -1.1
ACTN1-210ENST00000553779 PCK2Q16822 640 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 RSPO1Q2MKA7 263 aaPredicted RBP8.19□□□□□ -1.1
ACTN1-210ENST00000553779 KRTAP27-1Q3LI81 207 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 CDONQ4KMG0 1287 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 LRRC10Q5BKY1 277 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 KCTD8Q6ZWB6 473 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 C1QL4Q86Z23 238 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 ZDHHC21Q8IVQ6 265 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 REEP6Q96HR9 211 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 C7orf34Q96L11 122 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 DHRS1Q96LJ7 313 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 CCL13Q99616 98 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 KCNJ15Q99712 375 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 MICU1Q9BPX6 476 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 YIPF3Q9GZM5 350 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 SIRPDQ9H106 197 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 PRDM13Q9H4Q3 707 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 CNTD2Q9H8S5 307 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 BRD7Q9NPI1 651 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 PNRC2Q9NPJ4 139 aaKnown RBP8.19□□□□□ -1.1
ACTN1-210ENST00000553779 SIRT7Q9NRC8 400 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 CHCHD3Q9NX63 227 aaKnown RBP8.19□□□□□ -1.1
ACTN1-210ENST00000553779 DNAJC27Q9NZQ0 273 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 RPUSD1Q9UJJ7 312 aaKnown RBP8.19□□□□□ -1.1
ACTN1-210ENST00000553779 PRPF19Q9UMS4 504 aaKnown RBP8.19□□□□□ -1.1
ACTN1-210ENST00000553779 KPTNQ9Y664 436 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 COMMD3-BMI1R4GMX3 469 aa8.19□□□□□ -1.1
ACTN1-210ENST00000553779 PRKDCP78527 4128 aaKnown RBP8.18□□□□□ -1.1
ACTN1-210ENST00000553779 A0A1B0GWJ7 208 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 DPPA5A6NC42 116 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 TNFRSF11BO00300 401 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 TIPRLO75663 272 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 APOC1P02654 83 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 GYPBP06028 91 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 CSF1P09603 554 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 MMP9P14780 707 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 MUC1P15941 1255 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-210ENST00000553779 CFL1P23528 166 aaKnown RBP8.18□□□□□ -1.1
ACTN1-210ENST00000553779 DDOSTP39656 456 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 IER3P46695 156 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 WDR38Q5JTN6 314 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 SAMD4BQ5PRF9 694 aaKnown RBP8.18□□□□□ -1.1
ACTN1-210ENST00000553779 C8orf82Q6P1X6 216 aaPredicted RBP8.18□□□□□ -1.1
ACTN1-210ENST00000553779 LYPD4Q6UWN0 246 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 FAM57BQ71RH2 274 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 LDLRAD3Q86YD5 345 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 ERI1Q8IV48 349 aaKnown RBP8.18□□□□□ -1.1
ACTN1-210ENST00000553779 LINC00471Q8N535 108 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 GCSAMQ8N6F7 178 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 FAM216BQ8N7L0 139 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 OR6N2Q8NGY6 317 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 LINC01006Q8NI28 216 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 FAM81AQ8TBF8 368 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 PGAM5Q96HS1 289 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 RTL8AQ9BWD3 113 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 OR10A2Q9H208 303 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 SEMA6AQ9H2E6 1030 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 IL1RAPQ9NPH3 570 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 VPREB3Q9UKI3 123 aa8.18□□□□□ -1.1
ACTN1-210ENST00000553779 MEIOCA2RUB1 952 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 ZNF593O00488 134 aaPredicted RBP8.17□□□□□ -1.1
ACTN1-210ENST00000553779 NPFFO15130 113 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 ARPC2O15144 300 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 KRT36O76013 467 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 CCNB2O95067 398 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 TSPAN15O95858 294 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 ZNF3P17036 446 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 NDUFB7P17568 137 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 PRDX6P30041 224 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 GSSP48637 474 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 CAPZA1P52907 286 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 BLVRAP53004 296 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 CSNK2BP67870 215 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 IL5RAQ01344 420 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 EGR3Q06889 387 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 PGBD2Q6P3X8 592 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 Q6ZTK2 550 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 SLC16A9Q7RTY1 509 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 COMMD2Q86X83 199 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.17□□□□□ -1.1
ACTN1-210ENST00000553779 SLC37A3Q8NCC5 494 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 CSNK2A3Q8NEV1 391 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 OR1M1Q8NGA1 313 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 OR9Q2Q8NGE9 314 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 NPRL2Q8WTW4 380 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 TSSK6Q9BXA6 273 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 TOR3AQ9H497 397 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 GORASP2Q9H8Y8 452 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 BAIAP2Q9UQB8 552 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 DSCAML1Q8TD84 2053 aa8.17□□□□□ -1.1
ACTN1-210ENST00000553779 A0A1B0GW55 424 aa8.16□□□□□ -1.1
ACTN1-210ENST00000553779 DHRS12A0PJE2 317 aa8.16□□□□□ -1.1
ACTN1-210ENST00000553779 CDIPTO14735 213 aa8.16□□□□□ -1.1
ACTN1-210ENST00000553779 SOX14O95416 240 aa8.16□□□□□ -1.1
ACTN1-210ENST00000553779 PTBP3O95758 552 aaKnown RBP8.16□□□□□ -1.1
ACTN1-210ENST00000553779 H2BFMP0C1H6 154 aa8.16□□□□□ -1.1
ACTN1-210ENST00000553779 DUX4L2P0CJ85 424 aa8.16□□□□□ -1.1
ACTN1-210ENST00000553779 DUX4L3P0CJ86 424 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms