RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 TRIM36Q9NQ86 728 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 FKBP14Q9NWM8 211 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 C14orf119Q9NWQ9 140 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 FRRS1LQ9P0K9 344 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 CLEC2DQ9UHP7 191 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 PIGLQ9Y2B2 252 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 RHBDD3Q9Y3P4 386 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 MPC1Q9Y5U8 109 aa11.75□□□□□ -0.53
TUBB3-202ENST00000553656 PRRC2AP48634 2157 aaKnown RBP11.74□□□□□ -0.53
TUBB3-202ENST00000553656 IGHV4-30-2A0A087WSY4 118 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 TRBV2A0A0J9YWF9 115 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 LOC107986453A0A1B0GWG9 222 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 A0A1B0GWJ7 208 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 TMEM212A6NML5 194 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 DHRS7CA6NNS2 312 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 CLDN25C9JDP6 229 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 LYNX1G3V0Z9 82 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 CST4P01036 141 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 LYNX1P0DP58 116 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 SLC25A16P16260 332 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 EEF1B2P24534 225 aaKnown RBP11.74□□□□□ -0.53
TUBB3-202ENST00000553656 ACKR3P25106 362 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 C21orf33P30042 268 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-202ENST00000553656 CRYBB2P43320 205 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 KIR3DL2P43630 455 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 TGM4P49221 684 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 CDH15P55291 814 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 NANOS3P60323 173 aaKnown RBP11.74□□□□□ -0.53
TUBB3-202ENST00000553656 MVKQ03426 396 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 PRDX4Q13162 271 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 TNK1Q13470 666 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 CCDC58Q4VC31 144 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 PEG10Q86TG7 708 aaKnown RBP11.74□□□□□ -0.53
TUBB3-202ENST00000553656 ZDHHC23Q8IYP9 409 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 CELF2-AS1Q8N7Q2 184 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 GATAD2BQ8WXI9 593 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 DVL3Q92997 716 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-202ENST00000553656 TIMD4Q96H15 378 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 SOX7Q9BT81 388 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 RTL8AQ9BWD3 113 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 MND1Q9BWT6 205 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 CCDC90BQ9GZT6 254 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 BABAM2Q9NXR7 383 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 PPP1R3CQ9UQK1 317 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 CREBBPQ92793 2442 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 MYO9AB2RTY4 2548 aa11.74□□□□□ -0.53
TUBB3-202ENST00000553656 A0A1B0GTI1 187 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 TRIM64A6NGJ6 449 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 TRIM64BA6NI03 449 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 A6NLC8 198 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 LRRC30A6NM36 301 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 ZNF850A8MQ14 1090 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 H3BSH0 61 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 IFNL4K9M1U5 179 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 PPIHO43447 177 aaKnown RBP11.73□□□□□ -0.53
TUBB3-202ENST00000553656 RGS10O43665 173 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 ISG15P05161 165 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 IRF2P14316 349 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 FAHP16930 419 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 CCL1P22362 96 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 CRHBPP24387 322 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 COL8A2P25067 703 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 CD200P41217 278 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 GPR6P46095 362 aaPredicted RBP11.73□□□□□ -0.53
TUBB3-202ENST00000553656 WNT4P56705 351 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 TAS2R43P59537 309 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 SLC35A2P78381 396 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 RPL22L1Q6P5R6 122 aaKnown RBP11.73□□□□□ -0.53
TUBB3-202ENST00000553656 DNM1P46Q6ZS02 220 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 KCTD8Q6ZWB6 473 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 PLPP7Q8NBV4 271 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 OR11L1Q8NGX0 322 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 OR14K1Q8NGZ2 314 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 OR5AK2Q8NH90 309 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 HPS1Q92902 700 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 YIPF5Q969M3 257 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 FN3KRPQ9HA64 309 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 ZNF275Q9NSD4 429 aaPredicted RBP11.73□□□□□ -0.53
TUBB3-202ENST00000553656 TREM2Q9NZC2 230 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 HHLA2Q9UM44 414 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 PCDHGB5Q9Y5G0 923 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 V9GYS6 101 aa11.73□□□□□ -0.53
TUBB3-202ENST00000553656 TEX15Q9BXT5 2789 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 OR4C45A6NMZ5 311 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 E9PI62 339 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 H7C1Q1 480 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 RP2O75695 350 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 SERPINA3P01011 423 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 GRPP07492 148 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 ZNF20P17024 532 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 GIFP27352 417 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 NR4A2P43354 598 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 TMEM33P57088 247 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 CDK5R1Q15078 307 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 CLVS2Q5SYC1 327 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 RNLSQ5VYX0 342 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 PLCXD3Q63HM9 321 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 MOGAT3Q86VF5 341 aa11.72□□□□□ -0.53
TUBB3-202ENST00000553656 RDH10Q8IZV5 341 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms