RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ZNF696Q9H7X3 374 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 DYNLRB1Q9NP97 96 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 TRIM36Q9NQ86 728 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 ZDHHC8Q9ULC8 765 aa12.6□□□□□ -0.39
MTHFD1-204ENST00000553405 TRBV2A0A0J9YWF9 115 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 PLSCR5A0PG75 271 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 TMEM212A6NML5 194 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 PLPP2O43688 288 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 HLA-DPB1P04440 258 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 BMP4P12644 408 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 FAHP16930 419 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 CA6P23280 308 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 MAP2K3P46734 347 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 EFNA4P52798 201 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 FAM209AQ5JX71 171 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 TMEM244Q5VVB8 128 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 ASPHD2Q6ICH7 369 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 WDR86Q86TI4 376 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 CSNK2A3Q8NEV1 391 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 SEMA6DQ8NFY4 1073 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 OR10AD1Q8NGE0 317 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 HPSE2Q8WWQ2 592 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 ITPKCQ96DU7 683 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 OPALINQ96PE5 141 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 TMEM100Q9NV29 134 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 GPR160Q9UJ42 338 aa12.59□□□□□ -0.39
MTHFD1-204ENST00000553405 TANC2Q9HCD6 1990 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 H3BSH0 61 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 SYT7O43581 403 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 SPRY3O43610 288 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 F12P00748 615 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 EEF1B2P24534 225 aaKnown RBP12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 RIPPLY1Q0D2K3 151 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 HNRNPA0Q13151 305 aaKnown RBP12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 MAB21L1Q13394 359 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 TPBGQ13641 420 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 TESK1Q15569 626 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 PCGF3Q3KNV8 242 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 ZMAT1Q5H9K5 638 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 UBE2UQ5VVX9 321 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 CCDC54Q8NEL0 328 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 OR5AK2Q8NH90 309 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 GHSRQ92847 366 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 DVL3Q92997 716 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 ADAT3Q96EY9 351 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 ELMOD3Q96FG2 381 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 PERPQ96FX8 193 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 FOXC2Q99958 501 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 VRK1Q99986 396 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 CCDC90BQ9GZT6 254 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 RAB1BQ9H0U4 201 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 ISYNA1Q9NPH2 558 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 ZNF275Q9NSD4 429 aaPredicted RBP12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 HHLA2Q9UM44 414 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 EDARQ9UNE0 448 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 PIGLQ9Y2B2 252 aa12.58□□□□□ -0.4
MTHFD1-204ENST00000553405 TRBV5-5A0A0J9YX44 114 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 ZNF816-ZNF321PA0A0X1KG74 233 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 LOC100289279A0A1B0GTE1 492 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 A0A1B0GVI7 797 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 F5H5P2 479 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 GMDSO60547 372 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 RP2O75695 350 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 CD200P41217 278 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 ATP5J2P56134 94 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 TAS2R43P59537 309 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 CCL8P80075 99 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 MLLT11Q13015 90 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 PRDX4Q13162 271 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 MED22Q15528 200 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 TSTQ16762 297 aaKnown RBP12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 TGIF2LYQ8IUE0 185 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 ZNF676Q8N7Q3 588 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 OR2Z1Q8NG97 314 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 OR13C5Q8NGS8 318 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 NEU4Q8WWR8 484 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 OR5P3Q8WZ94 311 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 YIPF5Q969M3 257 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 DIRC2Q96SL1 478 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 ADAT1Q9BUB4 502 aaKnown RBP12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 SLC22A4Q9H015 551 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 IL19Q9UHD0 177 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 MPC1Q9Y5U8 109 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 ZANQ9Y493 2812 aa12.57□□□□□ -0.4
MTHFD1-204ENST00000553405 FLNAP21333 2647 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 A6NIN4 97 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 ANKRD30BLA7E2S9 258 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 ZNF850A8MQ14 1090 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 MTRF1O75570 445 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 TNFAIP8O95379 198 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 SMIM18P0DKX4 95 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 CELP19835 753 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 RBMXP38159 391 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 PMELP40967 661 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 GATA4P43694 442 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 MRPS11P82912 194 aaKnown RBP12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 SLC3A1Q07837 685 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 GPR50Q13585 617 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 FAM76BQ5HYJ3 339 aa12.56□□□□□ -0.4
MTHFD1-204ENST00000553405 ZNF529Q6P280 563 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms