RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 R3HDM4Q96D70 268 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 FUZQ9BT04 418 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 COPS4Q9BT78 406 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 IFT27Q9BW83 186 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 WDR13Q9H1Z4 485 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 OPA3Q9H6K4 179 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 METTL8Q9H825 291 aaKnown RBP7.39□□□□□ -1.23
SYNE2-209ENST00000553308 ELL3Q9HB65 397 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-209ENST00000553308 SAR1AQ9NR31 198 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 NDUFAF4Q9P032 175 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 KCNG2Q9UJ96 466 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF391Q9UJN7 358 aa7.39□□□□□ -1.23
SYNE2-209ENST00000553308 A0A1W2PQ09 198 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 NKX6-3A6NJ46 265 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 M0R1W7 72 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 NME4O00746 187 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 CDIPTO14735 213 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 TBX1O43435 398 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 XRCC2O43543 280 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 ANGPTL7O43827 346 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 NCK1P16333 377 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 NOS3P29474 1203 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 BMXP51813 675 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 FAM3AP98173 230 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.38□□□□□ -1.23
SYNE2-209ENST00000553308 DGUOKQ16854 277 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 SLC35F1Q5T1Q4 408 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 ATPAF1Q5TC12 328 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-209ENST00000553308 PGBD2Q6P3X8 592 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF788Q6ZQV5 615 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 SLC16A9Q7RTY1 509 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 DCXRQ7Z4W1 244 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 ARPINQ7Z6K5 226 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 ZDHHC21Q8IVQ6 265 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 FAM86B1Q8N7N1 296 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 CYB561A3Q8NBI2 242 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 OR9Q1Q8NGQ5 310 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 ZNRF4Q8WWF5 429 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 FAM162AQ96A26 154 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 SPSB4Q96A44 273 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 DUS3LQ96G46 650 aaKnown RBP7.38□□□□□ -1.23
SYNE2-209ENST00000553308 DHRS1Q96LJ7 313 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 GAFA1Q96PS6 74 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 NKX3-1Q99801 234 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-209ENST00000553308 NPFFR1Q9GZQ6 430 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 TLNRD1Q9H1K6 362 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF702PQ9H963 129 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 KRCC1Q9NPI7 259 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-209ENST00000553308 CENPMQ9NSP4 180 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 SERTAD4Q9NUC0 356 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 HAO2Q9NYQ3 351 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 SLC25A10Q9UBX3 287 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-209ENST00000553308 FAM32AQ9Y421 112 aaKnown RBP7.38□□□□□ -1.23
SYNE2-209ENST00000553308 CAPN7Q9Y6W3 813 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 COMMD3-BMI1R4GMX3 469 aa7.38□□□□□ -1.23
SYNE2-209ENST00000553308 NOTCH3Q9UM47 2321 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 hCG_38984A0A1B0GV85 526 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 K7EIL1 84 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 TIPRLO75663 272 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 SPARCP09486 303 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 IGLL1P15814 213 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 NDUFB7P17568 137 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 RHCEP18577 417 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 POU1F1P28069 291 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 DDOSTP39656 456 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 NAA10P41227 235 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-209ENST00000553308 GSK3BP49841 420 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 SLC7A2P52569 658 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 MXRA7P84157 204 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 TAF13Q15543 124 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 KLHL12Q53G59 568 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 NDUFA11Q86Y39 141 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 PROKR2Q8NFJ6 384 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 OR4F17Q8NGA8 305 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 OR51L1Q8NGJ5 315 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 OR4C15Q8NGM1 316 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 ANGPTL6Q8NI99 470 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 PIFOQ8TCI5 191 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 SLAMF6Q96DU3 332 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 C7orf34Q96L11 122 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 RAB3IPQ96QF0 476 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-209ENST00000553308 OR4F4Q96R69 305 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 KCNJ15Q99712 375 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 CITED2Q99967 270 aaPredicted RBP7.37□□□□□ -1.23
SYNE2-209ENST00000553308 PAPOLGQ9BWT3 736 aaKnown RBP7.37□□□□□ -1.23
SYNE2-209ENST00000553308 FAM234AQ9H0X4 552 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 DNTTIP1Q9H147 329 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 MEGF9Q9H1U4 602 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 RAB18Q9NP72 206 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 AP3M1Q9Y2T2 418 aa7.37□□□□□ -1.23
SYNE2-209ENST00000553308 SF3B6Q9Y3B4 125 aaKnown RBP7.37□□□□□ -1.23
SYNE2-209ENST00000553308 KMT2CQ8NEZ4 4911 aaKnown RBP7.36□□□□□ -1.23
SYNE2-209ENST00000553308 ZNF878C9JN71 531 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 H0YAE9 185 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 SIGLEC5O15389 551 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 AKR7A2O43488 359 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 GNALP38405 381 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 CX3CR1P49238 355 aa7.36□□□□□ -1.23
SYNE2-209ENST00000553308 CAV3P56539 151 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms