RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 MITFO75030 526 aaPredicted RBP13.17□□□□□ -0.3
COX6A1-203ENST00000550009 H2BFMP0C1H6 154 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 PRR23D2P0DMB1 279 aaPredicted RBP13.17□□□□□ -0.3
COX6A1-203ENST00000550009 OSMP13725 252 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 EPHA2P29317 976 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 SRSF4Q08170 494 aaKnown RBP13.17□□□□□ -0.3
COX6A1-203ENST00000550009 WDR82Q6UXN9 313 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 AQP12AQ8IXF9 295 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 OR8B12Q8NGG6 310 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 OTOSQ8NHW6 89 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 RPL3LQ92901 407 aaKnown RBP13.17□□□□□ -0.3
COX6A1-203ENST00000550009 PGAM5Q96HS1 289 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 COPS3Q9UNS2 423 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 VWFP04275 2813 aa13.17□□□□□ -0.3
COX6A1-203ENST00000550009 ANKRD30BLA7E2S9 258 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 ZNF850A8MQ14 1090 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 CDIPTO14735 213 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 GYG2O15488 501 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 E2F6O75461 281 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 LYNP07948 512 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 DAPP51397 102 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 ARF6P62330 175 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 APOFQ13790 326 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 FLOT2Q14254 428 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 WDR38Q5JTN6 314 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 TEX36Q5VZQ5 186 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 RBMS3Q6XE24 437 aaKnown RBP13.16□□□□□ -0.3
COX6A1-203ENST00000550009 C9orf139Q6ZV77 190 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 BTN2A1Q7KYR7 527 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 OR8S1Q8NH09 359 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 BCAS4Q8TDM0 211 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 HPSE2Q8WWQ2 592 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 PAPOLGQ9BWT3 736 aaKnown RBP13.16□□□□□ -0.3
COX6A1-203ENST00000550009 CADM1Q9BY67 442 aaKnown RBP13.16□□□□□ -0.3
COX6A1-203ENST00000550009 SLC22A4Q9H015 551 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 SIRPDQ9H106 197 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 DNAJB11Q9UBS4 358 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 LRP12Q9Y561 859 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 MEGF8Q7Z7M0 2845 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 DSCAML1Q8TD84 2053 aa13.16□□□□□ -0.3
COX6A1-203ENST00000550009 CENPVL3A0A0U1RRI6 287 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 RNASE1P07998 156 aaKnown RBP13.15□□□□□ -0.3
COX6A1-203ENST00000550009 PPIAL4GP0DN37 164 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 MDKP21741 143 aaPredicted RBP13.15□□□□□ -0.3
COX6A1-203ENST00000550009 SLC15A1P46059 708 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 PRDX4Q13162 271 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 SHFQ7M4L6 423 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 PAPD5Q8NDF8 572 aaKnown RBP13.15□□□□□ -0.3
COX6A1-203ENST00000550009 ST8SIA4Q92187 359 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 UTP4Q969X6 686 aaKnown RBP13.15□□□□□ -0.3
COX6A1-203ENST00000550009 ITPKCQ96DU7 683 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 SEMA6AQ9H2E6 1030 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 TOR3AQ9H497 397 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 TVP23BQ9NYZ1 205 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 ERVK-18Q9QC07 812 aa13.15□□□□□ -0.3
COX6A1-203ENST00000550009 TRAV38-1A0A0B4J264 116 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 ZNF879B4DU55 563 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 TMPRSS2O15393 492 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 ENSAO43768 121 aaKnown RBP13.14□□□□□ -0.31
COX6A1-203ENST00000550009 PRKYO43930 277 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 RHBDL1O75783 438 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 TOX4O94842 621 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 ALOX5APP20292 161 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 BLVRAP53004 296 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 RPS7P62081 194 aaKnown RBP13.14□□□□□ -0.31
COX6A1-203ENST00000550009 RELBQ01201 579 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 MFGE8Q08431 387 aaPredicted RBP13.14□□□□□ -0.31
COX6A1-203ENST00000550009 PLEKHG7Q6ZR37 379 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 PLPP7Q8NBV4 271 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 PIGCQ92535 297 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 LHX4Q969G2 390 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 WDFY2Q96P53 400 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 UNKLQ9H9P5 680 aaKnown RBP13.14□□□□□ -0.31
COX6A1-203ENST00000550009 ELL3Q9HB65 397 aaPredicted RBP13.14□□□□□ -0.31
COX6A1-203ENST00000550009 SLC25A19Q9HC21 320 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 DNAJB9Q9UBS3 223 aa13.14□□□□□ -0.31
COX6A1-203ENST00000550009 MGAM2Q2M2H8 2515 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
COX6A1-203ENST00000550009 GSC2O15499 205 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 AKR7A2O43488 359 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 PAICSP22234 425 aaKnown RBP13.13□□□□□ -0.31
COX6A1-203ENST00000550009 DDOSTP39656 456 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 CRISP1P54107 249 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 IKZF1Q13422 519 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 CEP78Q5JTW2 689 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 SCCPDHQ8NBX0 429 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 OR5P3Q8WZ94 311 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 PKP2Q99959 881 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 OPA3Q9H6K4 179 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 C14orf119Q9NWQ9 140 aa13.13□□□□□ -0.31
COX6A1-203ENST00000550009 NOP16Q9Y3C1 178 aaKnown RBP13.13□□□□□ -0.31
COX6A1-203ENST00000550009 A0A1W2PRD5 423 aa13.12□□□□□ -0.31
COX6A1-203ENST00000550009 A0A1W2PRF3 423 aa13.12□□□□□ -0.31
COX6A1-203ENST00000550009 A0A1W2PRM7 423 aa13.12□□□□□ -0.31
COX6A1-203ENST00000550009 FAM181BA6NEQ2 426 aa13.12□□□□□ -0.31
COX6A1-203ENST00000550009 PRODHO43272 600 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms