RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 OR56B2PQ8NGI1 322 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 SPTSSAQ969W0 71 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 ZNF799Q96GE5 643 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 CITED4Q96RK1 184 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 NDEL1Q9GZM8 345 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 MUC13Q9H3R2 512 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 RABEP2Q9H5N1 569 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 PNRC2Q9NPJ4 139 aaKnown RBP8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 INPP5EQ9NRR6 644 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 HAO2Q9NYQ3 351 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 NKIRAS1Q9NYS0 192 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 B9D1Q9UPM9 204 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 N6AMT1Q9Y5N5 214 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 SNX13Q9Y5W8 968 aa8.72□□□□□ -1.01
TRAFD1-206ENST00000549358 IGLV1-36A0A0B4J1U3 117 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 NKX6-3A6NJ46 265 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 ANKRD30BLA7E2S9 258 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 FFAR1O14842 300 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 PTP4A3O75365 173 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 LGALS4P56470 323 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 SELENOWP63302 87 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 DOC2BQ14184 412 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 TMEM95Q3KNT9 176 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 LRRC23Q53EV4 343 aaPredicted RBP8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 NANOGP8Q6NSW7 305 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 ZNF788Q6ZQV5 615 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 RRM2BQ7LG56 351 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 MKXQ8IYA7 352 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 OFCC1Q8IZS5 231 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 SLC26A10Q8NG04 563 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 DPF1Q92782 380 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 MED30Q96HR3 178 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 MAP6Q96JE9 813 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 GAFA1Q96PS6 74 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 CHID1Q9BWS9 393 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 NSRP1Q9H0G5 558 aaKnown RBP8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 WDR13Q9H1Z4 485 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 ELL3Q9HB65 397 aaPredicted RBP8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 GAR1Q9NY12 217 aaKnown RBP8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 CYB5R1Q9UHQ9 305 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 TCF19Q9Y242 345 aa8.71□□□□□ -1.02
TRAFD1-206ENST00000549358 TCRBV4S1A1TA0A5B7 111 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 A6NDX4 124 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 GLCEO94923 617 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 HLA-DQA2P01906 255 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 CHRM2P08172 466 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 PAICSP22234 425 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 KDELR2P33947 212 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 VDAC2P45880 294 aaPredicted RBP8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 DCTN2Q13561 401 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 SLC36A3Q495N2 470 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 TCTEX1D4Q5JR98 221 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 CASC10Q5T4H9 136 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 CENPVQ7Z7K6 275 aaPredicted RBP8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 FAM185AQ8N0U4 392 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 DYNAPQ8N1N2 210 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 C7orf26Q96N11 449 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 NMNAT3Q96T66 252 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 KRTAP17-1Q9BYP8 105 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 DNTTIP1Q9H147 329 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 PPP1R3EQ9H7J1 279 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 SIGLEC7Q9Y286 467 aa8.7□□□□□ -1.02
TRAFD1-206ENST00000549358 VGLL3A8MV65 326 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 SYNGR1O43759 233 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 CLIC3O95833 236 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 IFNW1P05000 195 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 ACAA1P09110 424 aaPredicted RBP8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 CCDC159P0C7I6 412 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 TROVE2P10155 538 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 SLC2A1P11166 492 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 COX7A1P24310 79 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 LMO1P25800 156 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 RPS6KA3P51812 740 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 CAV3P56539 151 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 ERVFRD-1P60508 538 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 CYLC2Q14093 348 aaPredicted RBP8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 DMRTC1Q5HYR2 192 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 DRAM2Q6UX65 266 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 DPY19L2P2Q6ZN68 376 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 LHFPL4Q7Z7J7 247 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 ZNRF1Q8ND25 227 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 ANGPTL6Q8NI99 470 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 RAB3IPQ96QF0 476 aaPredicted RBP8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 GPX7Q96SL4 187 aaPredicted RBP8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 SH3GL1Q99961 368 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 HEXA-AS1Q9H8Q6 139 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 ABCB10Q9NRK6 738 aa8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 TSSC4Q9Y5U2 329 aaPredicted RBP8.69□□□□□ -1.02
TRAFD1-206ENST00000549358 F2RL2O00254 374 aa8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 SIGLEC5O15389 551 aa8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 TIPRLO75663 272 aa8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 TXNDC12O95881 172 aa8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 RENP00797 406 aa8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 ALDOBP05062 364 aa8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 ZNF823P16415 610 aa8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 DDOSTP39656 456 aa8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 RPS27P42677 84 aaKnown RBP8.68□□□□□ -1.02
TRAFD1-206ENST00000549358 GABRA2P47869 451 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms