RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 FCGR1BQ92637 280 aa17.94■□□□□ 0.46
CACNB3-210ENST00000548874 OPALINQ96PE5 141 aa17.94■□□□□ 0.46
CACNB3-210ENST00000548874 SORCS2Q96PQ0 1159 aa17.94■□□□□ 0.46
CACNB3-210ENST00000548874 DIRC2Q96SL1 478 aa17.94■□□□□ 0.46
CACNB3-210ENST00000548874 TPK1Q9H3S4 243 aa17.94■□□□□ 0.46
CACNB3-210ENST00000548874 BEX4Q9NWD9 120 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-210ENST00000548874 PIGLQ9Y2B2 252 aa17.94■□□□□ 0.46
CACNB3-210ENST00000548874 ZNF281Q9Y2X9 895 aa17.94■□□□□ 0.46
CACNB3-210ENST00000548874 POLQO75417 2590 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 TACC2O95359 2948 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 PNMA8CA0A1B0GUJ8 204 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 LMX1BO60663 402 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 CD55P08174 381 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 FAHP16930 419 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 CA6P23280 308 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 RPS11P62280 158 aaKnown RBP eCLIP17.93■□□□□ 0.46
CACNB3-210ENST00000548874 PCGF3Q3KNV8 242 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 TMEM42Q69YG0 159 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 CDH24Q86UP0 819 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 C10orf35Q96D05 121 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 VRK1Q99986 396 aaPredicted RBP17.93■□□□□ 0.46
CACNB3-210ENST00000548874 GSX2Q9BZM3 304 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 RAB1BQ9H0U4 201 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 ENPP5Q9UJA9 477 aa17.93■□□□□ 0.46
CACNB3-210ENST00000548874 ITPR2Q14571 2701 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 H0YL77 283 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 SPRY3O43610 288 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 GMDSO60547 372 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 HSMCR30P0CW71 290 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 CPEP16870 476 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 MAGEB1P43366 347 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 DEFB113Q30KQ7 82 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 YIF1BQ5BJH7 314 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 FAM209AQ5JX71 171 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 OR2Z1Q8NG97 314 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 GPR148Q8TDV2 347 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 UBASH3BQ8TF42 649 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 UFD1Q92890 307 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 ELMOD3Q96FG2 381 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 PAPOLGQ9BWT3 736 aaKnown RBP17.92■□□□□ 0.46
CACNB3-210ENST00000548874 PPP1R3EQ9H7J1 279 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 ZNF275Q9NSD4 429 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-210ENST00000548874 NOP16Q9Y3C1 178 aaKnown RBP17.92■□□□□ 0.46
CACNB3-210ENST00000548874 MPC1Q9Y5U8 109 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 USF3Q68DE3 2245 aa17.92■□□□□ 0.46
CACNB3-210ENST00000548874 TRBV5-5A0A0J9YX44 114 aa17.91■□□□□ 0.46
CACNB3-210ENST00000548874 NDUFS7O75251 213 aa17.91■□□□□ 0.46
CACNB3-210ENST00000548874 HLA-DPB1P04440 258 aa17.91■□□□□ 0.46
CACNB3-210ENST00000548874 PRDX4Q13162 271 aa17.91■□□□□ 0.46
CACNB3-210ENST00000548874 KCTD8Q6ZWB6 473 aa17.91■□□□□ 0.46
CACNB3-210ENST00000548874 OR10AD1Q8NGE0 317 aa17.91■□□□□ 0.46
CACNB3-210ENST00000548874 OR13C3Q8NGS6 347 aa17.91■□□□□ 0.46
CACNB3-210ENST00000548874 NEU4Q8WWR8 484 aaPredicted RBP17.91■□□□□ 0.46
CACNB3-210ENST00000548874 ADAT3Q96EY9 351 aaPredicted RBP17.91■□□□□ 0.46
CACNB3-210ENST00000548874 TRMT61AQ96FX7 289 aaKnown RBP17.91■□□□□ 0.46
CACNB3-210ENST00000548874 ADAT1Q9BUB4 502 aaKnown RBP17.91■□□□□ 0.46
CACNB3-210ENST00000548874 PLEKHA1Q9HB21 404 aa17.91■□□□□ 0.46
CACNB3-210ENST00000548874 NAV2Q8IVL1 2488 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 ZNF850A8MQ14 1090 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 NCR1O76036 304 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 INMTO95050 263 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 IGHV4-39P01824 125 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 SMIM18P0DKX4 95 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 GNALP38405 381 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 PTH2RP49190 550 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 OR8G1Q15617 311 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 ARMCX4Q5H9R4 360 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 CLVS2Q5SYC1 327 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 LIPKQ5VXJ0 399 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 PHC2Q8IXK0 858 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 OR13C5Q8NGS8 318 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 PIGCQ92535 297 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 DVL3Q92997 716 aaPredicted RBP17.9■□□□□ 0.46
CACNB3-210ENST00000548874 ITPKCQ96DU7 683 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 CHST5Q9GZS9 411 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 ABCB9Q9NP78 766 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 DHDHQ9UQ10 334 aa17.9■□□□□ 0.46
CACNB3-210ENST00000548874 A6NIN4 97 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 F5H5P2 479 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 ERCC1P07992 297 aaPredicted RBP17.89■□□□□ 0.45
CACNB3-210ENST00000548874 TNFSF4P23510 183 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 EFNA4P52798 201 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 CCL8P80075 99 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 TNFAIP6P98066 277 aaPredicted RBP17.89■□□□□ 0.45
CACNB3-210ENST00000548874 SSX1Q16384 188 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 TSTQ16762 297 aaKnown RBP17.89■□□□□ 0.45
CACNB3-210ENST00000548874 SPRNQ5BIV9 151 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 SYT6Q5T7P8 510 aaPredicted RBP17.89■□□□□ 0.45
CACNB3-210ENST00000548874 ZDHHC23Q8IYP9 409 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 LRRC75A-AS1Q8N1F1 130 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 MS4A15Q8N5U1 240 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 SPERTQ8NA61 448 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 TSEN15Q8WW01 171 aaKnown RBP17.89■□□□□ 0.45
CACNB3-210ENST00000548874 HPSE2Q8WWQ2 592 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 PP6455Q8WZ26 134 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 MUL1Q969V5 352 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 FGGYQ96C11 551 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 IL19Q9UHD0 177 aa17.89■□□□□ 0.45
CACNB3-210ENST00000548874 SF3B6Q9Y3B4 125 aaKnown RBP17.89■□□□□ 0.45
CACNB3-210ENST00000548874 ANKRD61A6NGH8 418 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms