RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 FAM71E2Q8N5Q1 922 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 ZNF565Q8N9K5 539 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 EDARQ9UNE0 448 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 ALPK3Q96L96 1907 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 PCDH15Q96QU1 1955 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 CTDSPLO15194 276 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 TTRP02766 147 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 CCL4P13236 92 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 GLB1P16278 677 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 RAG2P55895 527 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 PLCXD3Q63HM9 321 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 SYT13Q7L8C5 426 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 CATSPERDQ86XM0 798 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 GPX8Q8TED1 209 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 ADIPOR1Q96A54 375 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 SUCNR1Q9BXA5 334 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 SRPK3Q9UPE1 567 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 PUS1Q9Y606 427 aaKnown RBP eCLIP12.58□□□□□ -0.4
CACNB3-209ENST00000548860 URGCP-MRPS24S4R325 110 aa12.58□□□□□ -0.4
CACNB3-209ENST00000548860 NSG1A0A0A6YYJ2 146 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 H3BP45 60 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 RCC1P18754 421 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-209ENST00000548860 PLGLB1Q02325 96 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 SLC25A45Q8N413 288 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 ZC3H10Q96K80 434 aaKnown RBP12.57□□□□□ -0.4
CACNB3-209ENST00000548860 RGCCQ9H4X1 137 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 FBXO7Q9Y3I1 522 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 BLACEA4D250 179 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 CXCL13O43927 109 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 ABHD16AO95870 558 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 OR13C7P0DN81 318 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 GDF1P27539 372 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 MICBQ29980 383 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 FBXO17Q96EF6 278 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 LRFN5Q96NI6 719 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 CALHM2Q9HA72 323 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 NPDC1Q9NQX5 325 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-209ENST00000548860 ZNF318Q5VUA4 2279 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 COL4A3Q01955 1670 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 TRBV5-5A0A0J9YX44 114 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 TXNL1O43396 289 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 P04436 131 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 CASRP41180 1078 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 PPA1Q15181 289 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 OR56B1Q8NGI3 324 aa12.57□□□□□ -0.4
CACNB3-209ENST00000548860 PRMT8Q9NR22 394 aaPredicted RBP12.57□□□□□ -0.4
CACNB3-209ENST00000548860 IGLV1-36A0A0B4J1U3 117 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 MS4A18H0YCH9 400 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 EIF3GO75821 320 aaKnown RBP eCLIP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 HOXC4P09017 264 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 ZNF14P17017 642 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 CNR1P21554 472 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 APOBEC1P41238 236 aaKnown RBP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 GLP1RP43220 463 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 KISS1Q15726 138 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 MS4A18Q3C1V0 323 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 FBXW12Q6X9E4 464 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 TERB2Q8NHR7 220 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 ZNF385AQ96PM9 386 aaKnown RBP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 GDF15Q99988 308 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 PISDQ9UG56 409 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 PKDREJQ9NTG1 2253 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 M0R135 149 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 PHF1O43189 567 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 DMWDQ09019 674 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 GUCA2BQ16661 112 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 PLEKHN1Q494U1 663 aaPredicted RBP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 TMEM229BQ8NBD8 167 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 ZNF799Q96GE5 643 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 CCDC74BQ96LY2 380 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 HIST1H2AAQ96QV6 131 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 SULT4A1Q9BR01 284 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 SPTBN1Q01082 2364 aaKnown RBP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 PLXNA2O75051 1894 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 FAM166BA8MTA8 275 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 CDK2AP1O14519 115 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 TO15178 435 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 RAD51DO75771 328 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 NFYBP25208 207 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 RPL7L1Q6DKI1 246 aaKnown RBP12.56□□□□□ -0.4
CACNB3-209ENST00000548860 LINC00114Q6XXX2 140 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 BEND4Q6ZU67 534 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 ANKRD37Q7Z713 158 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 SLC43A2Q8N370 569 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 EXD3Q8N9H8 876 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 SMRP1Q8NCR6 262 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 BVESQ8NE79 360 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 OR5M9Q8NGP3 310 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 FAM213BQ8TBF2 198 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 SCGB3A2Q96PL1 93 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 WDR13Q9H1Z4 485 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 MYOTQ9UBF9 498 aa12.56□□□□□ -0.4
CACNB3-209ENST00000548860 LILRA5A6NI73 299 aa12.55□□□□□ -0.4
CACNB3-209ENST00000548860 SLC16A14Q7RTX9 510 aa12.55□□□□□ -0.4
CACNB3-209ENST00000548860 BIVMQ86UB2 503 aa12.55□□□□□ -0.4
CACNB3-209ENST00000548860 BAP18Q8IXM2 172 aa12.55□□□□□ -0.4
CACNB3-209ENST00000548860 NKAIN3Q8N8D7 197 aa12.55□□□□□ -0.4
CACNB3-209ENST00000548860 KCNS2Q9ULS6 477 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms