RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 OXTP01178 125 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 MMP7P09237 267 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-204ENST00000546816 CLTAP09496 248 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 PGA5P0DJD9 388 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 CD99P14209 185 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 USF1P22415 310 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-204ENST00000546816 TAS2R43P59537 309 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 ILKQ13418 452 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 ITIH4Q14624 930 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 GCSAMLQ5JQS6 135 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 MFSD14CQ5VZR4 134 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 STUMQ69YW2 141 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 TMEM53Q6P2H8 277 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 C12orf54Q6X4T0 127 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 JAGN1Q8N5M9 183 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 CCDC148Q8NFR7 591 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 OR56A4Q8NGH8 313 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 RXFP4Q8TDU9 374 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 YIPF5Q969M3 257 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 KCNS1Q96KK3 526 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 KLF6Q99612 283 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-204ENST00000546816 GPR21Q99679 349 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 BPIFA3Q9BQP9 254 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 SLC7A5P2Q9GIP4 190 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 ZNF442Q9H7R0 627 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 AUNIPQ9H7T9 357 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 PLEKHF2Q9H8W4 249 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 TRIM45Q9H8W5 580 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-204ENST00000546816 BEX1Q9HBH7 125 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 MRM3Q9HC36 420 aaKnown RBP1.38□□□□□ -2.19
CCDC38-204ENST00000546816 AGPAT4Q9NRZ5 378 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 C20orf96Q9NUD7 363 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-204ENST00000546816 RCL1Q9Y2P8 373 aaKnown RBP1.38□□□□□ -2.19
CCDC38-204ENST00000546816 UBN2Q6ZU65 1347 aa1.38□□□□□ -2.19
CCDC38-204ENST00000546816 SIGLEC1Q9BZZ2 1709 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 IGKV1-27A0A075B6S5 117 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 TSPAN11A1L157 253 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 GABRPO00591 440 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 NME4O00746 187 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 CACNG3O60359 315 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 NMT2O60551 498 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 CNMDO75829 334 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 HLA-HP01893 362 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 MAS1P04201 325 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 PGA4P0DJD7 388 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 PGA3P0DJD8 388 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 ZNF35P13682 527 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 HMOX2P30519 316 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 CD70P32970 193 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 BMI1P35226 326 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 FUSP35637 526 aaKnown RBP eCLIP1.37□□□□□ -2.19
CCDC38-204ENST00000546816 NBL1P41271 181 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 FABP6P51161 128 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 ZNF266Q14584 549 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 ZNF829Q3KNS6 432 aaPredicted RBP1.37□□□□□ -2.19
CCDC38-204ENST00000546816 LUZP6Q538Z0 58 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 TWF2Q6IBS0 349 aaKnown RBP1.37□□□□□ -2.19
CCDC38-204ENST00000546816 OPN5Q6U736 354 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 EIF3MQ7L2H7 374 aaKnown RBP1.37□□□□□ -2.19
CCDC38-204ENST00000546816 APRG1Q8IVJ8 170 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 OFCC1Q8IZS5 231 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 ORMDL3Q8N138 153 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 ZNF645Q8N7E2 425 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 C8orf31Q8N9H6 132 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 OR10W1Q8NGF6 305 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 OR52E5Q8NH55 327 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 RERGQ96A58 199 aaPredicted RBP1.37□□□□□ -2.19
CCDC38-204ENST00000546816 RPEQ96AT9 228 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 OR4K3Q96R72 315 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 STACQ99469 402 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 C11orf70Q9BRQ4 267 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 MARVELD1Q9BSK0 173 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 CALN1Q9BXU9 219 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 PIGUQ9H490 435 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 ELOVL6Q9H5J4 265 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 RGS18Q9NS28 235 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 COMMD3-BMI1R4GMX3 469 aa1.37□□□□□ -2.19
CCDC38-204ENST00000546816 LOXHD1Q8IVV2 1947 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 SERTM2A0A1B0GWG4 89 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 J3QKU1 62 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 FCN3O75636 299 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 IGHV1-46P01743 117 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 TACSTD2P09758 323 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 OR8G3PP0DMU2 310 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 GSTM3P21266 225 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 GALP22466 123 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 APLNRP35414 380 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 PPICP45877 212 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 TGM4P49221 684 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 NDUFA8P51970 172 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 ELF3P78545 371 aaPredicted RBP1.36□□□□□ -2.19
CCDC38-204ENST00000546816 CACNA1DQ01668 2161 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 TRDNQ13061 729 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 TRMT5Q32P41 509 aaKnown RBP1.36□□□□□ -2.19
CCDC38-204ENST00000546816 MRPL2Q5T653 305 aaKnown RBP1.36□□□□□ -2.19
CCDC38-204ENST00000546816 HORMAD1Q86X24 394 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 RNF10Q8N5U6 811 aaKnown RBP1.36□□□□□ -2.19
CCDC38-204ENST00000546816 DRAM1Q8N682 238 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 SLC25A29Q8N8R3 303 aa1.36□□□□□ -2.19
CCDC38-204ENST00000546816 GPR26Q8NDV2 337 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms