RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 LHBP01229 141 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 CFHR2P36980 270 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 IL13RA1P78552 427 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 CBX1P83916 185 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 CDK5Q00535 292 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 SLC9A3R2Q15599 337 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 GFOD2Q3B7J2 385 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 METTL11BQ5VVY1 283 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 C16orf87Q6PH81 154 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 PRSS45Q7RTY3 260 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 SLC36A1Q7Z2H8 476 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 KRT77Q7Z794 578 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 CPOQ8IVL8 374 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 GALNT4Q8N4A0 578 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 LRRC29Q8WV35 223 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 NRBF2Q96F24 287 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 FAM71F1Q96KD3 344 aaPredicted RBP7.78□□□□□ -1.16
YBX3-218ENST00000546298 DMRTB1Q96MA1 342 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 ZNF48Q96MX3 618 aaPredicted RBP7.78□□□□□ -1.16
YBX3-218ENST00000546298 DUX5Q96PT3 197 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 HIST1H2AAQ96QV6 131 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 PCGF1Q9BSM1 259 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 RTL8AQ9BWD3 113 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 CTSZQ9UBR2 303 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 RHBDD3Q9Y3P4 386 aa7.78□□□□□ -1.16
YBX3-218ENST00000546298 DYSFO75923 2080 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 ACOD1A6NK06 481 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 TMEM210A6NLX4 147 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 DVL1O14640 695 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 CDIPTO14735 213 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 GPR37O15354 613 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 TMPRSS2O15393 492 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 SPRY1O43609 319 aaPredicted RBP7.77□□□□□ -1.17
YBX3-218ENST00000546298 SELENOFO60613 162 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 CST4P01036 141 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 GYPAP02724 150 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 CRYBA1P05813 215 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 ALOX5APP20292 161 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 PRKACGP22612 351 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 ANOS1P23352 680 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 PDCD1Q15116 288 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 SNAPC1Q16533 368 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 LCN1P1Q5VSP4 162 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 KCTD18Q6PI47 426 aaPredicted RBP7.77□□□□□ -1.17
YBX3-218ENST00000546298 DEGS2Q6QHC5 323 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 TMEM179BQ7Z7N9 219 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 FAM90A1Q86YD7 464 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 C11orf53Q8IXP5 236 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 PAPD5Q8NDF8 572 aaKnown RBP7.77□□□□□ -1.17
YBX3-218ENST00000546298 OR10Z1Q8NGY1 313 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 BCAS4Q8TDM0 211 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 GATAD2BQ8WXI9 593 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 C12orf43Q96C57 262 aaKnown RBP7.77□□□□□ -1.17
YBX3-218ENST00000546298 WDFY2Q96P53 400 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 AMELYQ99218 206 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 PRRG3Q9BZD7 231 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 YIPF3Q9GZM5 350 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 PRDM13Q9H4Q3 707 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 CNTD2Q9H8S5 307 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 SLC25A19Q9HC21 320 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 LAMP5Q9UJQ1 280 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 PCDHGB1Q9Y5G3 927 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 TMEM14AQ9Y6G1 99 aa7.77□□□□□ -1.17
YBX3-218ENST00000546298 A0A1B0GUS0 222 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 TCRBV3S1A0A5B6 114 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 NDUFB3O43676 98 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 ZNF254O75437 659 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 DNAJC8O75937 253 aaPredicted RBP7.76□□□□□ -1.17
YBX3-218ENST00000546298 EGR1P18146 543 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 MAP2K3P46734 347 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 CRISP1P54107 249 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 PSMA6P60900 246 aaKnown RBP7.76□□□□□ -1.17
YBX3-218ENST00000546298 PRDX4Q13162 271 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 DEFB112Q30KQ8 113 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 WDR82Q6UXN9 313 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 BRD3OSQ6XYD6 125 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 BTN2A1Q7KYR7 527 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 CMTM4Q8IZR5 234 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 TMEM86BQ8N661 226 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 FAM81AQ8TBF8 368 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 TBC1D15Q8TC07 691 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 ASB17Q8WXJ9 295 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 ST8SIA4Q92187 359 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 PIGCQ92535 297 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 ITPKCQ96DU7 683 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 MED30Q96HR3 178 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 RNF170Q96K19 258 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 C1orf147Q96MC9 270 aaPredicted RBP7.76□□□□□ -1.17
YBX3-218ENST00000546298 TBX15Q96SF7 602 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 CCL13Q99616 98 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 MROQ9BYG7 248 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 DNTTIP1Q9H147 329 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 TLNRD1Q9H1K6 362 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 RASSF4Q9H2L5 321 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 PAPOLBQ9NRJ5 636 aaKnown RBP7.76□□□□□ -1.17
YBX3-218ENST00000546298 TVP23BQ9NYZ1 205 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 H2AFY2Q9P0M6 372 aaPredicted RBP7.76□□□□□ -1.17
YBX3-218ENST00000546298 ZNF319Q9P2F9 582 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 DNAJB11Q9UBS4 358 aa7.76□□□□□ -1.17
YBX3-218ENST00000546298 RPUSD1Q9UJJ7 312 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms