RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 RABEPKQ7Z6M1 372 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 ARHGAP5-AS1Q96IT6 56 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 MOGAT1Q96PD6 335 aa10.96□□□□□ -0.65
NPC1L1-204ENST00000546276 DSPPQ9NZW4 1301 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 GPR31O00270 319 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 CTGFP29279 349 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 RNF4P78317 190 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 FMODQ06828 376 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 DMRTC1Q5HYR2 192 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 BHLHE23Q8NDY6 225 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 RHBDD1Q8TEB9 315 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 HEYLQ9NQ87 328 aaPredicted RBP10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 FRRS1LQ9P0K9 344 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 PCDHGA9Q9Y5G4 932 aaKnown RBP10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 SIRT4Q9Y6E7 314 aaPredicted RBP10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 OR2J2O76002 312 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 F10P00742 488 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 MEOX2P50222 304 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 TCTN1Q2MV58 587 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 C4orf17Q53FE4 359 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 SPANXN5Q5MJ07 72 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 CNEP1R1Q8N9A8 125 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF426Q9BUY5 554 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 ST3GAL6Q9Y274 331 aa10.96□□□□□ -0.66
NPC1L1-204ENST00000546276 F5P12259 2224 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 DHHO43323 396 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 GLAP06280 429 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 RAB4AP20338 218 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 CDAP32320 146 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 SNCAP37840 140 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 KCNK15Q9H427 330 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 CYTIPO60759 359 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 PDGFBP01127 241 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 IGF2P01344 180 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 FABP1P07148 127 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 KCNJ3P48549 501 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 OSR2Q8N2R0 312 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 OR52N4Q8NGI2 321 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 UTP23Q9BRU9 249 aaKnown RBP10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 MS4A7Q9GZW8 240 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF275Q9NSD4 429 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 HDGFL3Q9Y3E1 203 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 TRAV20A0A0B4J274 112 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 GLRA1P23415 457 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 CDC20BQ86Y33 519 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 OR2AE1Q8NHA4 323 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 DAZAP1Q96EP5 407 aaKnown RBP10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 SMIM7Q9BQ49 75 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 UQCC1Q9NVA1 299 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 B3GAT1Q9P2W7 334 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 ST6GALNAC2Q9UJ37 374 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 OSGIN2Q9Y236 505 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 MIA3Q5JRA6 1907 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 A0A1W2PPV9 198 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 IGHV3-9P01782 118 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 GCNT2Q8N0V5 402 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 OR1N1Q8NGS0 311 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 SAT2Q96F10 170 aaPredicted RBP10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 TMPRSS13Q9BYE2 586 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 CNTD2Q9H8S5 307 aa10.95□□□□□ -0.66
NPC1L1-204ENST00000546276 LILRA5A6NI73 299 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 NRG2O14511 850 aaPredicted RBP10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 CTLA4P16410 223 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 ISXQ2M1V0 245 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 CATSPERDQ86XM0 798 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF610Q8N9Z0 462 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 NECAP1Q8NC96 275 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 RPUSD4Q96CM3 377 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 CHST6Q9GZX3 395 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 CA10Q9NS85 328 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 ANKRD10Q9NXR5 420 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 SPTY2D1-AS1A0A0U1RR47 76 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 A0A1W2PPC4 97 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 OR4C45A6NMZ5 311 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 EPPINO95925 133 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 EDN3P14138 238 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 ABCD3P28288 659 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 DRD3P35462 400 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 CD200R1LQ6Q8B3 271 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 H2BFWTQ7Z2G1 175 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 GVQW1Q8N7I0 195 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 OR4F5Q8NH21 305 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 PISDQ9UG56 409 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 KIAA0100Q14667 2235 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 OR8U8P0C7N1 319 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 TNFSF4P23510 183 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 ENDOGQ14249 297 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 SP6Q3SY56 376 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 ZNF362Q5T0B9 420 aaPredicted RBP10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 FAM199XQ6PEV8 388 aaPredicted RBP10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 CBLN3Q6UW01 205 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 SLC25A26Q70HW3 274 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 YRDCQ86U90 279 aaKnown RBP10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 C8orf44Q96CB5 159 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 OR51I2Q9H344 312 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 TMPRSS5Q9H3S3 457 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 PAPPA2Q9BXP8 1791 aa10.94□□□□□ -0.66
NPC1L1-204ENST00000546276 TIMM8AO60220 97 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms