RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 DDOQ99489 341 aa11.91□□□□□ -0.5
RTN3-214ENST00000545432 ACAA1P09110 424 aaPredicted RBP11.9□□□□□ -0.5
RTN3-214ENST00000545432 CD33P20138 364 aa11.9□□□□□ -0.5
RTN3-214ENST00000545432 CENPAP49450 140 aa11.9□□□□□ -0.5
RTN3-214ENST00000545432 CSNK2BP67870 215 aa11.9□□□□□ -0.5
RTN3-214ENST00000545432 HABP2Q14520 560 aaPredicted RBP11.9□□□□□ -0.5
RTN3-214ENST00000545432 RRM2BQ7LG56 351 aa11.9□□□□□ -0.5
RTN3-214ENST00000545432 RCC1LQ96I51 464 aaKnown RBP11.9□□□□□ -0.5
RTN3-214ENST00000545432 RSRC1Q96IZ7 334 aaKnown RBP11.9□□□□□ -0.5
RTN3-214ENST00000545432 NMNAT3Q96T66 252 aa11.9□□□□□ -0.5
RTN3-214ENST00000545432 FUZQ9BT04 418 aa11.9□□□□□ -0.5
RTN3-214ENST00000545432 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.9□□□□□ -0.5
RTN3-214ENST00000545432 V9GYY5 206 aaPredicted RBP11.9□□□□□ -0.5
RTN3-214ENST00000545432 CDIPTO14735 213 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 XRCC2O43543 280 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 DUS4LO95620 317 aaKnown RBP11.89□□□□□ -0.51
RTN3-214ENST00000545432 HIST1H1CP16403 213 aaKnown RBP11.89□□□□□ -0.51
RTN3-214ENST00000545432 MSX2P35548 267 aaPredicted RBP11.89□□□□□ -0.51
RTN3-214ENST00000545432 BMXP51813 675 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 FAM3AP98173 230 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 SPIBQ01892 262 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 BLMHQ13867 455 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 IFI44LQ53G44 452 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 DEFB121Q5J5C9 76 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 SMARCD3Q6STE5 483 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 CBLL1Q75N03 491 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 OR2T12Q8NG77 320 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 OR5T2Q8NGG2 359 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 OR5K1Q8NHB7 308 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 ERMAPQ96PL5 475 aaPredicted RBP11.89□□□□□ -0.51
RTN3-214ENST00000545432 SLC25A10Q9UBX3 287 aaPredicted RBP11.89□□□□□ -0.51
RTN3-214ENST00000545432 ENPP4Q9Y6X5 453 aa11.89□□□□□ -0.51
RTN3-214ENST00000545432 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 OR6C68A6NDL8 312 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 A6NDX4 124 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 UNC119BA6NIH7 251 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 NKX6-3A6NJ46 265 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 ANKRD30BLA7E2S9 258 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 IDH3BO43837 385 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 RENP00797 406 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 PAX6P26367 422 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 GSK3BP49841 420 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 ZBTB37Q5TC79 503 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 OR8S1Q8NH09 359 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 H1FXQ92522 213 aaKnown RBP11.88□□□□□ -0.51
RTN3-214ENST00000545432 DHRS1Q96LJ7 313 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 KCNJ15Q99712 375 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 WDR13Q9H1Z4 485 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 RPRD1BQ9NQG5 326 aaKnown RBP11.88□□□□□ -0.51
RTN3-214ENST00000545432 ZNF391Q9UJN7 358 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 TCF19Q9Y242 345 aa11.88□□□□□ -0.51
RTN3-214ENST00000545432 SACSQ9NZJ4 4579 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 BBIP1A8MTZ0 92 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 SLC35A2P78381 396 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 CNN3Q15417 329 aaKnown RBP11.87□□□□□ -0.51
RTN3-214ENST00000545432 KLHL12Q53G59 568 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 KRT74Q7RTS7 529 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 SLC16A9Q7RTY1 509 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 PRSS45Q7RTY3 260 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 MKXQ8IYA7 352 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 OR4K13Q8NH42 304 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 SGK3Q96BR1 496 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 PRSS22Q9GZN4 317 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 PPP1R3EQ9H7J1 279 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 HEXA-AS1Q9H8Q6 139 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 CD300AQ9UGN4 299 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 ZNF222Q9UK12 451 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 LRP12Q9Y561 859 aa11.87□□□□□ -0.51
RTN3-214ENST00000545432 hCG_38984A0A1B0GV85 526 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 ANGPTL7O43827 346 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 H1F0P07305 194 aaKnown RBP11.86□□□□□ -0.51
RTN3-214ENST00000545432 TROVE2P10155 538 aaKnown RBP eCLIP11.86□□□□□ -0.51
RTN3-214ENST00000545432 PSKH1P11801 424 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 DCTDP32321 178 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 DYNLT3P51808 116 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 CD69Q07108 199 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 SEC23BQ15437 767 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 TEX30Q5JUR7 227 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 Q6ZS46 218 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 ZDHHC21Q8IVQ6 265 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 OR4C15Q8NGM1 316 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 SIKE1Q9BRV8 207 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 AP3M1Q9Y2T2 418 aa11.86□□□□□ -0.51
RTN3-214ENST00000545432 IGKV1D-17A0A075B6S4 117 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 TRBV4-1A0A0J9YWV2 114 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 A0A1W2PQ09 198 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 H0YAE9 185 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 MRASO14807 208 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 RHBDL1O75783 438 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 NHLRC4P0CG21 123 aaPredicted RBP11.85□□□□□ -0.51
RTN3-214ENST00000545432 ZNF823P16415 610 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 PAICSP22234 425 aaKnown RBP11.85□□□□□ -0.51
RTN3-214ENST00000545432 SLC6A6P31641 620 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 PRKXP51817 358 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 AGBL2Q5U5Z8 902 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 CYP4Z1Q86W10 505 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 DYNAPQ8N1N2 210 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 ZNRF4Q8WWF5 429 aa11.85□□□□□ -0.51
RTN3-214ENST00000545432 SDSLQ96GA7 329 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms