RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 AKR7A2O43488 359 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 XRCC3O43542 346 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 MPZL1O95297 269 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 RPS16P62249 146 aaKnown RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 TRA2AQ13595 282 aaKnown RBP eCLIP11.47□□□□□ -0.574e-8■■■■□ 20
CHD4-211ENST00000544484 BTLAQ7Z6A9 289 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 APOBEC3DQ96AK3 386 aaPredicted RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 S1PR3Q99500 378 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 MTCH1Q9NZJ7 389 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 TRAV17A0A0B4J275 112 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 HEXAP06865 529 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 FUT6P51993 359 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 TOMM34Q15785 309 aaPredicted RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 B3GNTL1Q67FW5 361 aaPredicted RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 H3F3CQ6NXT2 135 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 C1orf87Q8N0U7 546 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 CCL2P13500 99 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 RPL12P30050 165 aaKnown RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 OR2T2Q6IF00 324 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 ZNF425Q6IV72 752 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 ACOT7LQ6ZUV0 252 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 ZFP62Q8NB50 900 aaPredicted RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 SLC35E1Q96K37 410 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 LRRC3BQ96PB8 259 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 OCIAD1Q9NX40 245 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 H3BP45 60 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 TRAPPC2P0DI81 140 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 TRAPPC2BP0DI82 140 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 XAF1Q6GPH4 301 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 ZNF774Q6NX45 483 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 ZNF439Q8NDP4 499 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 SMIM4Q8WVI0 70 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 MRPS24Q96EL2 167 aaKnown RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 CDX2Q99626 313 aaPredicted RBP11.47□□□□□ -0.57
CHD4-211ENST00000544484 MED9Q9NWA0 146 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 FBXO4Q9UKT5 387 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 SCN3AQ9NY46 2000 aa11.47□□□□□ -0.57
CHD4-211ENST00000544484 SCGB1D1O95968 90 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 SMIM15Q7Z3B0 74 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 CMBLQ96DG6 245 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 ESRP2Q9H6T0 727 aaKnown RBP11.46□□□□□ -0.57
CHD4-211ENST00000544484 SPINT1O43278 529 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 HLA-HP01893 362 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 HOXC4P09017 264 aaPredicted RBP11.46□□□□□ -0.57
CHD4-211ENST00000544484 LIMS3P0CW19 117 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 LIMS4P0CW20 117 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 SPINK2P20155 84 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 ZNF816Q0VGE8 651 aaPredicted RBP11.46□□□□□ -0.57
CHD4-211ENST00000544484 SNTB1Q13884 538 aaKnown RBP11.46□□□□□ -0.57
CHD4-211ENST00000544484 HMGN3Q15651 99 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 ZIC1Q15915 447 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 NAA40Q86UY6 237 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 CDH26Q8IXH8 852 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 KCNIP2Q9NS61 270 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 OR2F2O95006 317 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 CCL4P13236 92 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 CD80P33681 288 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 ZNF83P51522 516 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 SUB1P53999 127 aaKnown RBP eCLIP11.46□□□□□ -0.575e-7■■■■■ 29.8
CHD4-211ENST00000544484 OR2F1Q13607 317 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 OR2Z1Q8NG97 314 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 OR4D9Q8NGE8 314 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 MCHR2Q969V1 340 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 TECTBQ96PL2 329 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 GAB2Q9UQC2 676 aa11.46□□□□□ -0.57
CHD4-211ENST00000544484 EPPINO95925 133 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 MESP2Q0VG99 397 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 ADPRHL1Q8NDY3 354 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 OR10D3Q8NH80 312 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 GPX8Q8TED1 209 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 NEU3Q9UQ49 428 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 HRKO00198 91 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 ZNF32P17041 273 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 THBS4P35443 961 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.58
CHD4-211ENST00000544484 RAC1P63000 192 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 C1QL3Q5VWW1 255 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 C15orf54Q8N8G6 183 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 KIAA1958Q8N8K9 716 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 OR8D4Q8NGM9 314 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 APH1BQ8WW43 257 aa11.46□□□□□ -0.58
CHD4-211ENST00000544484 WDR89Q96FK6 387 aaPredicted RBP11.46□□□□□ -0.58
CHD4-211ENST00000544484 TRMT61AQ96FX7 289 aaKnown RBP11.46□□□□□ -0.58
CHD4-211ENST00000544484 ZNF230Q9UIE0 474 aaPredicted RBP11.46□□□□□ -0.58
CHD4-211ENST00000544484 SPTA1P02549 2419 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 H0Y8G0 127 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 PYCARD-AS1I3L0S3 204 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 BMP5P22003 454 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 RAB13P51153 203 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 SLC25A1P53007 311 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 SPINK14Q6IE38 97 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 SFTPA2Q8IWL1 248 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 PP6455Q8WZ26 134 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 GINS3Q9BRX5 216 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 DLL4Q9NR61 685 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 TERTO14746 1132 aaKnown RBP11.45□□□□□ -0.58
CHD4-211ENST00000544484 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
CHD4-211ENST00000544484 OR5G3P0C626 314 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 AVPR2P30518 371 aa11.45□□□□□ -0.58
CHD4-211ENST00000544484 GALNSP34059 522 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms